2YQ8
Crystal structure of the SeMet-labeled N-terminal domain and peptide substrate binding domain of alpha subunit of prolyl-4 hydroxylase type I from human.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08336 | e2yq8A1 | A: alpha bundles | X: Prolyl 4-hydroxylase alpha subunit dimerization domain (From Topology) | H: Prolyl 4-hydroxylase alpha subunit dimerization domain (From Topology) | T: Prolyl 4-hydroxylase alpha subunit dimerization domain | F: PF08336 | ECOD (1.6) |
A | PF07719 | e2yq8A2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF07719 | ECOD (1.6) |
B | PF08336 | e2yq8B1 | A: alpha bundles | X: Prolyl 4-hydroxylase alpha subunit dimerization domain (From Topology) | H: Prolyl 4-hydroxylase alpha subunit dimerization domain (From Topology) | T: Prolyl 4-hydroxylase alpha subunit dimerization domain | F: PF08336 | ECOD (1.6) |
B | PF07719 | e2yq8B2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF07719 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 6.10.140.1460 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
A | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
B | 6.10.140.1460 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
B | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006620 | Prolyl 4-hydroxylase, alpha subunit | Domain | |
IPR044862 | Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain | Domain | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR013547 | Prolyl 4-hydroxylase alpha-subunit, N-terminal | Domain | |
IPR045054 | Prolyl 4-hydroxylase | Family | |
IPR019734 | Tetratricopeptide repeat | Repeat | |
IPR005123 | Oxoglutarate/iron-dependent dioxygenase | Domain |