2YN9 | pdb_00002yn9

Cryo-EM structure of gastric H+,K+-ATPase with bound rubidium


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APiwie2yn9A6 A: a/b three-layered sandwichesX: DEATH domainH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: PiwiECOD (v294.1)
AJmjC,JmjNe2yn9A2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: JmjC,JmjNECOD (v294.1)
Be2yn9B2 A: a/b three-layered sandwichesX: Tautomerase/MIF-likeH: Tautomerase/MIFT: Catalytic domain of hepatitis C virus NS2-3 proteaseF:ECOD (v294.1)
BGlyco_hydro_39e2yn9B3 A: a/b three-layered sandwichesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Glyco_hydro_39ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00689Cation transporting ATPase, C-terminus (Cation_ATPase_C)Cation transporting ATPase, C-terminus- Family
PF00690Cation transporter/ATPase, N-terminus (Cation_ATPase_N)Cation transporter/ATPase, N-terminusMembers of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Domain
PF08282haloacid dehalogenase-like hydrolase (Hydrolase_3)haloacid dehalogenase-like hydrolaseThis family contains haloacid dehalogenase-like hydrolase enzymes. Domain
PF00122P-type ATPase actuator domain (E1-E2_ATPase)P-type ATPase actuator domainThis entry describes the actuator (A) domain found in P-type ATPases (also known as E1-E2 ATPases). The A domain serves as a built-in protein phosphatase that functions to dephosphorylate the phosphorylated P domain. The A domain is the smallest of t ...This entry describes the actuator (A) domain found in P-type ATPases (also known as E1-E2 ATPases). The A domain serves as a built-in protein phosphatase that functions to dephosphorylate the phosphorylated P domain. The A domain is the smallest of the three cytoplasmic domains. It consists of a distorted jellyroll structure and two short helices [1-2].
Domain
PF13246P-type ATPase, cytoplasmic domain N (Cation_ATPase)P-type ATPase, cytoplasmic domain N- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1
POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage