2YMP | pdb_00002ymp

Chloroacetic acid complex bound L-haloacid dehalogenase from a Rhodobacteraceae family bacterium

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPeptidase_M10e2ympB1 A: alpha arraysX: Major vault protein (MVP) structural repeat domainH: Major vault protein (MVP) structural repeat domainT: Major vault protein (MVP) structural repeat domainF: Peptidase_M10ECOD (v295.2)
APeptidase_M10e2ympA1 A: alpha arraysX: Major vault protein (MVP) structural repeat domainH: Major vault protein (MVP) structural repeat domainT: Major vault protein (MVP) structural repeat domainF: Peptidase_M10ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.1000 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold HAD superfamily/HAD-likeCATH (4.3.0)
B1.10.150.240 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
A3.40.50.1000 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold HAD superfamily/HAD-likeCATH (4.3.0)
A1.10.150.240 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
L-HALOACID DEHALOGENASE - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR006328L-2-Haloacid dehalogenaseFamily
A, B
IPR051540S-2-haloalkanoic acid dehalogenaseFamily
A, B
IPR036412HAD-like superfamilyHomologous Superfamily
A, B
IPR023214HAD superfamilyHomologous Superfamily
A, B
IPR006439HAD hydrolase, subfamily IAFamily
A, B
IPR023198Phosphoglycolate phosphatase-like, domain 2Homologous Superfamily