The structural basis for recognition of J-base containing DNA by a novel DNA-binding domain in JBP1
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | EUF07973 | e2xseA1 | A: alpha arrays | X: Thymine dioxygenase JBP1 DNA-binding domain-like | H: Thymine dioxygenase JBP1 DNA-binding domain (From Topology) | T: Thymine dioxygenase JBP1 DNA-binding domain | F: EUF07973 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.120.1440 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | JBP1, DNA-binding domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| THYMINE DIOXYGENASE JBP1 |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR043111 | JBP1, DNA-binding domain superfamily | Homologous Superfamily | |
| IPR041241 | Thymine dioxygenase JBP1, DNA-binding domain | Domain | |
| IPR024779 | 2OGFeDO JBP1/TET, oxygenase domain | Domain |














