2XFC

CHIKUNGUNYA E1 E2 ENVELOPE GLYCOPROTEINS FITTED IN SEMLIKI FOREST VIRUS cryo-EM MAP


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAlpha_E1_glycop_2nde2xfcA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E1_glycop_2ndECOD (1.6)
AAlpha_E1_glycop_1ste2xfcA2 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Alpha_E1_glycop_1stECOD (1.6)
C [auth D]Alpha_E1_glycop_2nde2xfcD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E1_glycop_2ndECOD (1.6)
C [auth D]Alpha_E1_glycop_1ste2xfcD2 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Alpha_E1_glycop_1stECOD (1.6)
E [auth F]Alpha_E1_glycop_2nde2xfcF1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E1_glycop_2ndECOD (1.6)
E [auth F]Alpha_E1_glycop_1ste2xfcF2 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Alpha_E1_glycop_1stECOD (1.6)
G [auth H]Alpha_E1_glycop_2nde2xfcH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E1_glycop_2ndECOD (1.6)
G [auth H]Alpha_E1_glycop_1ste2xfcH2 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Alpha_E1_glycop_1stECOD (1.6)
BAlpha_E2_glycop_2nde2xfcB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_2ndECOD (1.6)
BAlpha_E2_glycop_1ste2xfcB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_1stECOD (1.6)
BAlpha_E2_glycop_3rde2xfcB3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_3rdECOD (1.6)
D [auth E]Alpha_E2_glycop_2nde2xfcE2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_2ndECOD (1.6)
D [auth E]Alpha_E2_glycop_1ste2xfcE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_1stECOD (1.6)
D [auth E]Alpha_E2_glycop_3rde2xfcE3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_3rdECOD (1.6)
F [auth G]Alpha_E2_glycop_2nde2xfcG2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_2ndECOD (1.6)
F [auth G]Alpha_E2_glycop_1ste2xfcG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_1stECOD (1.6)
F [auth G]Alpha_E2_glycop_3rde2xfcG3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_3rdECOD (1.6)
H [auth I]Alpha_E2_glycop_2nde2xfcI2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_2ndECOD (1.6)
H [auth I]Alpha_E2_glycop_1ste2xfcI1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_1stECOD (1.6)
H [auth I]Alpha_E2_glycop_3rde2xfcI3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Alpha_E2_glycop_3rdECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth D],
E [auth F],
G [auth H]
PF01589Alphavirus E1 glycoprotein (Alpha_E1_glycop)Alphavirus E1 glycoprotein- Family
B,
D [auth E],
F [auth G],
H [auth I]
PF00943Alphavirus E2 glycoprotein (Alpha_E2_glycop)Alphavirus E2 glycoprotein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C [auth D],
E [auth F],
G [auth H]
E1 ENVELOPE GLYCOPROTEIN
B,
D [auth E],
F [auth G],
H [auth I]
E2 ENVELOPE GLYCOPROTEIN

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
C [auth D],
E [auth F],
G [auth H]
IPR002533Alphavirus E3 spike glycoproteinDomain
A,
C [auth D],
E [auth F],
G [auth H]
IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR014756Immunoglobulin E-setHomologous Superfamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR042304Alphavirus E2 glycoprotein, domain AHomologous Superfamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR009003Peptidase S1, PA clanHomologous Superfamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR042305Alphavirus E2 glycoprotein, domain BHomologous Superfamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR042306Alphavirus E2 glycoprotein, domain CHomologous Superfamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR000936Alphavirus E2 glycoproteinFamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR000930Peptidase S3, togavirinDomain
A,
C [auth D],
E [auth F],
G [auth H]
IPR002548Alphavirus E1 glycoproteinDomain
A,
C [auth D],
E [auth F],
G [auth H]
IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
A,
C [auth D],
E [auth F],
G [auth H]
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR002533Alphavirus E3 spike glycoproteinDomain
B,
D [auth E],
F [auth G],
H [auth I]
IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR014756Immunoglobulin E-setHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR042304Alphavirus E2 glycoprotein, domain AHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR009003Peptidase S1, PA clanHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR042305Alphavirus E2 glycoprotein, domain BHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR042306Alphavirus E2 glycoprotein, domain CHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR000936Alphavirus E2 glycoproteinFamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR000930Peptidase S3, togavirinDomain
B,
D [auth E],
F [auth G],
H [auth I]
IPR002548Alphavirus E1 glycoproteinDomain
B,
D [auth E],
F [auth G],
H [auth I]
IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
B,
D [auth E],
F [auth G],
H [auth I]
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily