2XD8 | pdb_00002xd8

Capsid structure of the infectious Prochlorococcus Cyanophage P-SSP7


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FRibosomal_S27e2xd8F1 A: a/b three-layered sandwichesX: Rossmann-likeH: Glycosyl hydrolase domainT: Glycosyl hydrolase domainF: Ribosomal_S27ECOD (v294.1)
EBeta-Caspe2xd8E1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: Beta-CaspECOD (v294.1)
DRibosomal_S27e2xd8D1 A: a/b three-layered sandwichesX: Rossmann-likeH: Glycosyl hydrolase domainT: Glycosyl hydrolase domainF: Ribosomal_S27ECOD (v294.1)
BBeta-Caspe2xd8B1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: Beta-CaspECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF21703Major capsid protein (Gp10A-like)Major capsid proteinThis protein family includes Major capsid protein from Bacteriophage T7 (Gp10A) and similar proteins from tailed bacteriophages and bacterial prophages. Gp10A subunits adopt an HK97-like conformation to form the viral shell [2]. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR049301Capsid Gp10A/Gp10B-like domainDomain