2WVU | pdb_00002wvu

Crystal structure of a Michaelis complex of alpha-L-fucosidase GH29 from Bacteroides thetaiotaomicron with the synthetic substrate 4- nitrophenyl-alpha-L-fucose

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DHSP90,HATPase_c_3e2wvuD1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: HSP90,HATPase_c_3ECOD (develop294)
CHSP90,HATPase_c_3e2wvuC1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: HSP90,HATPase_c_3ECOD (develop294)
BHSP90,HATPase_c_3e2wvuB1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: HSP90,HATPase_c_3ECOD (develop294)
AHSP90,HATPase_c_3e2wvuA1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: HSP90,HATPase_c_3ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
D2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
C3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
C2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
ALPHA-L-FUCOSIDASE

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR016286Alpha-L-fucosidase, metazoa-typeFamily
A, B, C, D
IPR057739Glycoside hydrolase family 29, N-terminalDomain
A, B, C, D
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B, C, D
IPR013780Glycosyl hydrolase, all-betaHomologous Superfamily
A, B, C, D
IPR000933Glycoside hydrolase, family 29Family