2WS9 | pdb_00002ws9

Equine Rhinitis A Virus at Low pH

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C [auth 3]	d2ws93_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	automated matches	automated matches	(Equine rhinitis A virus ) [TaxId: 47000 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth 3]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8068060	3000918	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth 1]	SdrG_C_C	e2ws911	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (v294.1)
B [auth 2]	SdrG_C_C	e2ws921	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (v294.1)
C [auth 3]	SdrG_C_C	e2ws931	A: a/b three-layered sandwiches	X: Lipocalins/Streptavidin	H: Zn-dependent exopeptidases	T: Zn-dependent exopeptidases	F: SdrG_C_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Provenance Source (Version)
A [auth 1]	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
B [auth 2]	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)
C [auth 3]	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1]	P1	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid
B [auth 2]	P1	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid
C [auth 3]	P1	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid
D [auth 4]	P1	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1]	IPR029053	Viral coat protein subunit	Homologous Superfamily
A [auth 1]	IPR059138	Picornavirus capsid VP1	Domain
A [auth 1]	IPR001676	Picornavirus capsid	Domain
A [auth 1]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
A [auth 1]	IPR037080	Capsid protein VP4 superfamily, Picornavirus	Homologous Superfamily
B [auth 2]	IPR029053	Viral coat protein subunit	Homologous Superfamily
B [auth 2]	IPR059138	Picornavirus capsid VP1	Domain
B [auth 2]	IPR001676	Picornavirus capsid	Domain
B [auth 2]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
B [auth 2]	IPR037080	Capsid protein VP4 superfamily, Picornavirus	Homologous Superfamily
C [auth 3]	IPR029053	Viral coat protein subunit	Homologous Superfamily
C [auth 3]	IPR059138	Picornavirus capsid VP1	Domain
C [auth 3]	IPR001676	Picornavirus capsid	Domain
C [auth 3]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
C [auth 3]	IPR037080	Capsid protein VP4 superfamily, Picornavirus	Homologous Superfamily
D [auth 4]	IPR029053	Viral coat protein subunit	Homologous Superfamily
D [auth 4]	IPR059138	Picornavirus capsid VP1	Domain
D [auth 4]	IPR001676	Picornavirus capsid	Domain
D [auth 4]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
D [auth 4]	IPR037080	Capsid protein VP4 superfamily, Picornavirus	Homologous Superfamily