Crystal structure of the short chain dehydrogenase Galactitol- Dehydrogenase (GatDH) of Rhodobacter sphaeroides in complex with NAD+ and 1,2-Pentandiol
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | d2wdzc_ | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | (Cereibacter sphaeroides ) [TaxId: 1063 ], | SCOPe (2.08) |
| D | d2wdzd_ | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | (Cereibacter sphaeroides ) [TaxId: 1063 ], | SCOPe (2.08) |
| B | d2wdzb_ | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | (Cereibacter sphaeroides ) [TaxId: 1063 ], | SCOPe (2.08) |
| A | d2wdza_ | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | (Cereibacter sphaeroides ) [TaxId: 1063 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | SDR-like | 8066978 | 3000038 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | SDR-like | 8066978 | 3000038 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | SDR-like | 8066978 | 3000038 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Short-chain dehydrogenases/reductases, SDR | 8066977 | 4000029 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | SDR-like | 8066978 | 3000038 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | RVP | e2wdzC1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (develop294) |
| D | RVP | e2wdzD1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (develop294) |
| B | RVP | e2wdzB1 | A: alpha bundles | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (develop294) |
| A | Pyrophosphatase | e2wdzA1 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: sensor domains | T: sensor domains | F: Pyrophosphatase | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| D | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
| A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| - | - |














