Structural and spectroscopic characterization of photoconverting fluorescent protein Dendra2
External Resource: Annotation
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
A | d2vzxa_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
C | d2vzxc1 | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
C | d2vzxc2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
D | d2vzxd_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
E | d2vzxe1 | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
E | d2vzxe2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
F | d2vzxf_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
H | d2vzxh1 | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
H | d2vzxh2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
B | d2vzxb1 | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
B | d2vzxb2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
G | d2vzxg_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | (Dendronephthya sp. SSAL-2002 ) [TaxId: 191210 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2 Family | Fluorescent proteins | 8081034 | 4001049 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | GFP-like | 8081035 | 3000576 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | GFP-like | 8081035 | 3000576 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | GFP-like | 8081035 | 3000576 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | GFP-like | 8081035 | 3000576 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | GFP-like | 8081035 | 3000576 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | GFP-like | 8081035 | 3000576 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | GFP-like | 8081035 | 3000576 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | GFP-like | 8081035 | 3000576 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF01353 | e2vzxA1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
C | PF01353 | e2vzxC1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
D | PF01353 | e2vzxD1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
E | PF01353 | e2vzxE1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
F | PF01353 | e2vzxF1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
H | PF01353 | e2vzxH1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
B | PF01353 | e2vzxB1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
G | PF01353 | e2vzxG1 | A: beta barrels | X: GFP-like (From Topology) | H: GFP-like (From Topology) | T: GFP-like | F: PF01353 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Green fluorescent protein | | | - |