2VPY | pdb_00002vpy

Polysulfide reductase with bound quinone inhibitor, pentachlorophenol (PCP)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth F]SCOP2B Superfamily4Fe-4S ferredoxins 8087201 3000020 SCOP2B (2022-06-29)
BSCOP2B Superfamily4Fe-4S ferredoxins 8087201 3000020 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth E]Molydop_bindinge2vpyE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: double psiF: Molydop_bindingECOD (1.6)
D [auth E]Molybdop_Fe4S4e2vpyE3 A: a+b two layersX: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)T: Formate dehydrogenase/DMSO reductase, domain 1F: Molybdop_Fe4S4ECOD (1.6)
D [auth E]Molybdopterin_2nde2vpyE4 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: Molybdopterin_2ndECOD (1.6)
D [auth E]Molybdopterin_1st_1e2vpyE2 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: Molybdopterin_1st_1ECOD (1.6)
AMolydop_bindinge2vpyA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: double psiF: Molydop_bindingECOD (1.6)
AMolybdop_Fe4S4e2vpyA3 A: a+b two layersX: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)T: Formate dehydrogenase/DMSO reductase, domain 1F: Molybdop_Fe4S4ECOD (1.6)
AMolybdopterin_2nde2vpyA4 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: Molybdopterin_2ndECOD (1.6)
AMolybdopterin_1st_1e2vpyA2 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: Molybdopterin_1st_1ECOD (1.6)
F [auth G]NrfD_2_Ce2vpyG2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: NrfD_2_CECOD (1.6)
F [auth G]NrfD_2e2vpyG1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: NrfD_2ECOD (1.6)
CNrfD_2_Ce2vpyC2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: NrfD_2_CECOD (1.6)
CNrfD_2e2vpyC1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: NrfD_2ECOD (1.6)
E [auth F]Fer4_11e2vpyF1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_11ECOD (1.6)
E [auth F]Fer4_11_1e2vpyF2 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_11_1ECOD (1.6)
BFer4_11e2vpyB1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_11ECOD (1.6)
BFer4_11_1e2vpyB2 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_11_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage