Family 89 Glycoside Hydrolase from Clostridium perfringens in complex with 2-acetamido-1,2-dideoxynojirmycin
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | F5_F8_type_C_1 | e2vc9A2 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: F5_F8_type_C_1 | ECOD (1.6) |
| A | NAGLU_C | e2vc9A4 | A: alpha bundles | X: Hyaluronidase domain-like | H: Hyaluronidase post-catalytic domain-like (From Topology) | T: Hyaluronidase post-catalytic domain-like | F: NAGLU_C | ECOD (1.6) |
| A | NAGLU | e2vc9A5 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: NAGLU | ECOD (1.6) |
| A | NAGLU_N | e2vc9A1 | A: mixed a+b and a/b | X: Zincin-like | H: beta-N-acetylhexosaminidase-like domain (From Topology) | T: beta-N-acetylhexosaminidase-like domain | F: NAGLU_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.2.0) |
| A | 3.30.379.10 | Alpha Beta | 2-Layer Sandwich | Chitobiase | domain 2 | CATH (4.2.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.2.0) |
| A | 1.20.120.670 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | N-acetyl-b-d-glucoasminidase | CATH (4.2.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| ALPHA-N-ACETYLGLUCOSAMINIDASE | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR024240 | Alpha-N-acetylglucosaminidase, N-terminal | Domain | |
| IPR003961 | Fibronectin type III | Domain | |
| IPR029018 | Beta-hexosaminidase-like, domain 2 | Homologous Superfamily | |
| IPR007781 | Alpha-N-acetylglucosaminidase | Family | |
| IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
| IPR024732 | Alpha-N-acetylglucosaminidase, C-terminal | Domain | |
| IPR024733 | Alpha-N-acetylglucosaminidase, tim-barrel domain | Domain | |
| IPR000421 | Coagulation factor 5/8, C-terminal domain | Domain | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |
