2V9U | pdb_00002v9u

Rim domain of main porin from Mycobacteria smegmatis


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AV-sete2v9uA1 A: a/b three-layered sandwichesX: Profilin-likeH: sensor domainsT: sensor domainsF: V-setECOD (v294.1)
DProteasomee2v9uD1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: ProteasomeECOD (v294.1)
GProteasomee2v9uG1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: ProteasomeECOD (v294.1)
HProteasomee2v9uH1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: ProteasomeECOD (v294.1)
FProteasomee2v9uF1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: ProteasomeECOD (v294.1)
EProteasomee2v9uE1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: ProteasomeECOD (v294.1)
CProteasomee2v9uC1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: ProteasomeECOD (v294.1)
BProteasomee2v9uB1 A: a/b three-layered sandwichesX: HTHH: NudixT: NudixF: ProteasomeECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF09203MspA (MspA)MspAMspA is a membrane porin produced by Mycobacteria, allowing hydrophilic nutrients to enter the bacterium. The protein forms a tightly interconnected octamer with eightfold rotation symmetry that resembles a goblet and contains a central channel. Each ...MspA is a membrane porin produced by Mycobacteria, allowing hydrophilic nutrients to enter the bacterium. The protein forms a tightly interconnected octamer with eightfold rotation symmetry that resembles a goblet and contains a central channel. Each subunit fold contains a beta-sandwich of Ig-like topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR036435Leukocidin/porin MspA superfamilyHomologous Superfamily
A, B, C, D, E
IPR015286Porin family, mycobacterial-typeFamily