2R7A
Crystal Structure of a Periplasmic Heme Binding Protein from Shigella dysenteriae
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2r7ab_ | Alpha and beta proteins (a/b) | Chelatase-like | 'Helical backbone' metal receptor | automated matches | automated matches | (Shigella dysenteriae ) [TaxId: 622 ], | SCOPe (2.08) |
| A | d2r7aa_ | Alpha and beta proteins (a/b) | Chelatase-like | 'Helical backbone' metal receptor | automated matches | automated matches | (Shigella dysenteriae ) [TaxId: 622 ], | SCOPe (2.08) |
| C | d2r7ac_ | Alpha and beta proteins (a/b) | Chelatase-like | 'Helical backbone' metal receptor | automated matches | automated matches | (Shigella dysenteriae ) [TaxId: 622 ], | SCOPe (2.08) |
| D | d2r7ad_ | Alpha and beta proteins (a/b) | Chelatase-like | 'Helical backbone' metal receptor | automated matches | automated matches | (Shigella dysenteriae ) [TaxId: 622 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Peripla_BP_2_N | e2r7aB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| A | Peripla_BP_2_N | e2r7aA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| C | Peripla_BP_2_N | e2r7aC1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| D | Peripla_BP_2_N | e2r7aD1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.3.0) |
| A | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.3.0) |
| C | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.3.0) |
| D | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01497 | Periplasmic binding protein (Peripla_BP_2) | Periplasmic binding protein | This is sensor domain found in bacterial periplasmic binding proteins, several of which are involved in iron and cobalamin transport [1,2,3]. Among its ligands are siderophores bacillibactin, enterobactin and iron(III)-hydroxamates (Matilla et. al., ... | Domain |
