Crystal structure of a dimeric ferredoxin-like protein (bb1511) from bordetella bronchiseptica rb50 at 1.90 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2qycb1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Dimeric alpha+beta barrel | automated matches | automated matches | (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], | SCOPe (2.08) |
| B | d2qycb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], | SCOPe (2.08) |
| A | d2qyca1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Dimeric alpha+beta barrel | automated matches | automated matches | (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], | SCOPe (2.08) |
| A | d2qyca2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bordetella bronchiseptica RB50 ) [TaxId: 257310 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Dimeric alpha+beta barrel | 8088613 | 3000089 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Plant stress-induced protein | 8088612 | 4000637 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Dimeric alpha+beta barrel | 8088613 | 3000089 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | PK_Tyr_Ser-Thr | e2qycB1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: Nudix | F: PK_Tyr_Ser-Thr | ECOD (v294.1) |
| A | SspB | e2qycA1 | A: a/b three-layered sandwiches | X: Profilin-like | H: sensor domains | T: sensor domains | F: SspB | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.70.100 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) | |
| A | 3.30.70.100 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR013097 | Stress responsive alpha+beta-barrel | Domain | |
| IPR011008 | Dimeric alpha-beta barrel | Homologous Superfamily |
