2QSD | pdb_00002qsd

Crystal structure of a protein Il1583 from Idiomarina loihiensis

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	NLPC_P60	e2qsdH3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: NLPC_P60	ECOD (v294.1)
G	NLPC_P60	e2qsdG3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: NLPC_P60	ECOD (v294.1)
F	NLPC_P60	e2qsdF3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: NLPC_P60	ECOD (v294.1)
E	NLPC_P60	e2qsdE3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: NLPC_P60	ECOD (v294.1)
D	NLPC_P60	e2qsdD3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: NLPC_P60	ECOD (v294.1)
C	NLPC_P60	e2qsdC3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: NLPC_P60	ECOD (v294.1)
B	NLPC_P60	e2qsdB3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: NLPC_P60	ECOD (v294.1)
A	DUF1543	e2qsdA1	A: a/b three-layered sandwiches	X: Cysteine proteinases-like	H: Cysteine proteinases	T: Cysteine proteinases	F: DUF1543	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.10.20.10	Alpha Beta	Roll	Ubiquitin-like (UB roll)		CATH (4.3.0)
H	3.50.100.10	Alpha Beta	3-Layer(bba) Sandwich	protein il1583 fold	protein il1583 domain	CATH (4.3.0)
G	3.10.20.10	Alpha Beta	Roll	Ubiquitin-like (UB roll)		CATH (4.3.0)
G	3.50.100.10	Alpha Beta	3-Layer(bba) Sandwich	protein il1583 fold	protein il1583 domain	CATH (4.3.0)
F	3.10.20.10	Alpha Beta	Roll	Ubiquitin-like (UB roll)		CATH (4.3.0)
F	3.50.100.10	Alpha Beta	3-Layer(bba) Sandwich	protein il1583 fold	protein il1583 domain	CATH (4.3.0)
E	3.10.20.10	Alpha Beta	Roll	Ubiquitin-like (UB roll)		CATH (4.3.0)
E	3.50.100.10	Alpha Beta	3-Layer(bba) Sandwich	protein il1583 fold	protein il1583 domain	CATH (4.3.0)
D	3.10.20.10	Alpha Beta	Roll	Ubiquitin-like (UB roll)		CATH (4.3.0)
D	3.50.100.10	Alpha Beta	3-Layer(bba) Sandwich	protein il1583 fold	protein il1583 domain	CATH (4.3.0)
C	3.10.20.10	Alpha Beta	Roll	Ubiquitin-like (UB roll)		CATH (4.3.0)
C	3.50.100.10	Alpha Beta	3-Layer(bba) Sandwich	protein il1583 fold	protein il1583 domain	CATH (4.3.0)
B	3.10.20.10	Alpha Beta	Roll	Ubiquitin-like (UB roll)		CATH (4.3.0)
B	3.50.100.10	Alpha Beta	3-Layer(bba) Sandwich	protein il1583 fold	protein il1583 domain	CATH (4.3.0)
A	3.10.20.10	Alpha Beta	Roll	Ubiquitin-like (UB roll)		CATH (4.3.0)
A	3.50.100.10	Alpha Beta	3-Layer(bba) Sandwich	protein il1583 fold	protein il1583 domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF07566	Domain of Unknown Function (DUF1543) (DUF1543)	Domain of Unknown Function (DUF1543)	This domain is found as 1-2 copies in a small family of proteins of unknown function.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011440	Domain of unknown function DUF1543	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.