2QIK | pdb_00002qik

Crystal structure of YkqA from Bacillus subtilis. Northeast Structural Genomics Target SR631

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	GGACT	e2qikA3	A: a/b three-layered sandwiches	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: GGACT	ECOD (v294.1)
A	Glyco_hydro_32C	e2qikA4	A: a/b three-layered sandwiches	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Glyco_hydro_32C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.490.10	Alpha Beta	Roll	Hypothetical upf0131 protein ytfp	Gamma-glutamyl cyclotransferase-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13772	AIG2-like family (AIG2_2)	AIG2-like family	-	Family
A	PF06094	Gamma-glutamyl cyclotransferase, AIG2-like (GGACT)	Gamma-glutamyl cyclotransferase, AIG2-like	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	UPF0131 protein ykqA	amidine-lyase activity lyase activity gamma-glutamylaminecyclotransferase activity catalytic activity carbon-nitrogen lyase activity acyltransferase activity transferase activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036568	Gamma-glutamyl cyclotransferase-like superfamily	Homologous Superfamily
A	IPR039126	Gamma-glutamylaminecyclotransferase	Family
A	IPR013024	Gamma-glutamyl cyclotransferase-like	Domain
A	IPR009288	Gamma-glutamylcyclotransferase, AIG2-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.