Crystal structure of Q88U62_LACPL from Lactobacillus plantarum. Northeast Structural Genomics target LpR71
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d2pjqd_ | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | HD domain | Uncharacterized protein LP2664 | (Lactiplantibacillus plantarum WCFS1 ) [TaxId: 220668 ], | SCOPe (2.08) |
| C | d2pjqc_ | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | HD domain | Uncharacterized protein LP2664 | (Lactiplantibacillus plantarum WCFS1 ) [TaxId: 220668 ], | SCOPe (2.08) |
| B | d2pjqb_ | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | HD domain | Uncharacterized protein LP2664 | (Lactiplantibacillus plantarum WCFS1 ) [TaxId: 220668 ], | SCOPe (2.08) |
| A | d2pjqa1 | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | HD domain | Uncharacterized protein LP2664 | (Lactiplantibacillus plantarum WCFS1 ) [TaxId: 220668 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | HD-domain/PDEase-like | 8035744 | 3000943 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | HD-domain/PDEase-like | 8035744 | 3000943 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | HD-domain/PDEase-like | 8035744 | 3000943 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | HD domain-like | 8023364 | 4000705 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | HD-domain/PDEase-like | 8035744 | 3000943 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | PolyA_pol_RNAbd | e2pjqD1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: Rpp14/Pop5-like | T: Rpp14/Pop5-like | F: PolyA_pol_RNAbd | ECOD (v294.1) |
| C | PolyA_pol_RNAbd | e2pjqC1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: Rpp14/Pop5-like | T: Rpp14/Pop5-like | F: PolyA_pol_RNAbd | ECOD (v294.1) |
| B | PolyA_pol_RNAbd | e2pjqB1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: Rpp14/Pop5-like | T: Rpp14/Pop5-like | F: PolyA_pol_RNAbd | ECOD (v294.1) |
| A | HD | e2pjqA1 | A: a+b two layers | X: PDEase-like | H: HD-domain/PDEase-like | T: HD-domain/PDEase-like | F: HD | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 1.10.472.50 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
| D | 1.20.58.1910 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
| C | 1.10.472.50 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
| C | 1.20.58.1910 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
| B | 1.10.472.50 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
| B | 1.20.58.1910 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
| A | 1.10.472.50 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
| A | 1.20.58.1910 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
