2P6R

Crystal structure of superfamily 2 helicase Hel308 in complex with unwound DNA

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
C [auth A]d2p6ra1 All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain RecQ helicase DNA-binding domain-like Hel308 helicase (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
C [auth A]d2p6ra2 All alpha proteins Sec63 N-terminal domain-like Sec63 N-terminal domain-like Achaeal helicase C-terminal domain Hel308 helicase (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)
C [auth A]d2p6ra3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Tandem AAA-ATPase domain Hel308 helicase (Archaeoglobus fulgidus ) [TaxId: 2234 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2 FamilySF2 helicase DNA-binding domain-like8003047 4000204 SCOP2 (2022-06-29)
C [auth A]SCOP2 FamilyHel308 C-terminal domain-like8003048 4000238 SCOP2 (2022-06-29)
C [auth A]SCOP2 FamilyTandem AAA-ATPase domain8003046 4000282 SCOP2 (2022-06-29)
C [auth A]SCOP2 SuperfamilyWinged helix DNA-binding domain8017517 3000034 SCOP2 (2022-06-29)
C [auth A]SCOP2 SuperfamilyBrl domain-like8003049 3000115 SCOP2 (2022-06-29)
C [auth A]SCOP2 SuperfamilyHelix-hairpin-helix tandem8004406 3000163 SCOP2 (2022-06-29)
C [auth A]SCOP2 SuperfamilyRecA-like P-loop NTPases8017519 3002019 SCOP2 (2022-06-29)
C [auth A]SCOP2 SuperfamilyRecA-like P-loop NTPases8017520 3002019 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]PRK02362_1ste2p6rA1 A: alpha arraysX: HTHH: HTHT: wingedF: PRK02362_1stECOD (1.6)
C [auth A]HHH_5_1e2p6rA2 A: alpha arraysX: HhH/H2THH: SAM-like subdomain in Sec63-like proteins (From Topology)T: SAM-like subdomain in Sec63-like proteinsF: HHH_5_1ECOD (1.6)
C [auth A]PRK02362_2nde2p6rA3 A: alpha arraysX: Sec63 N-terminal subdomain-like (From Topology)H: Sec63 N-terminal subdomain-like (From Topology)T: Sec63 N-terminal subdomain-likeF: PRK02362_2ndECOD (1.6)
C [auth A]DEAD_1e2p6rA4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_1ECOD (1.6)
C [auth A]Helicase_C_5e2p6rA5 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_5ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth A]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)
C [auth A]1.10.3380.30 Mainly Alpha Orthogonal Bundle Sec63 N-terminal domain-like fold CATH (4.3.0)
C [auth A]1.10.150.20 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)