Structural Genomics, the crystal structure of a putative ABC transporter domain from Porphyromonas gingivalis W83
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d2p0sb_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | PG0945 N-terminal domain-like | Uncharacterized protein PG0945 | (Porphyromonas gingivalis W83 ) [TaxId: 242619 ], | SCOPe (2.08) |
| A | d2p0sa1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | PG0945 N-terminal domain-like | Uncharacterized protein PG0945 | (Porphyromonas gingivalis W83 ) [TaxId: 242619 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8035299 | 3000083 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | PG0945 N-terminal domain-like | 8022919 | 4002488 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Type 2 solute binding protein-like | 8035299 | 3000083 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | DegT_DnrJ_EryC1, Beta_elim_lyase | e2p0sB1 | A: alpha bundles | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: DegT_DnrJ_EryC1, Beta_elim_lyase | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| ABC transporter, permease protein, putative |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR051449 | ABC-2 integral membrane transporter component | Family | |
| IPR013525 | ABC-2 type transporter, transmembrane domain | Domain |
