2OZB
Structure of a human Prp31-15.5K-U4 snRNA complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth D] | d2ozbd1 | Alpha and beta proteins (a+b) | Bacillus chorismate mutase-like | L30e-like | L30e/L7ae ribosomal proteins | Spliceosomal 15.5kd protein | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth A] | d2ozba1 | Alpha and beta proteins (a+b) | Bacillus chorismate mutase-like | L30e-like | L30e/L7ae ribosomal proteins | Spliceosomal 15.5kd protein | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth B] | d2ozbb1 | All alpha proteins | Nop domain | Nop domain | Nop domain | U4/U6 small nuclear ribonucleoprotein Prp31 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
F [auth E] | d2ozbe_ | All alpha proteins | Nop domain | Nop domain | Nop domain | U4/U6 small nuclear ribonucleoprotein Prp31 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth D] | SCOP2B Superfamily | L30e-like | 8043738 | 3001739 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2 Family | L30e/L7ae ribosomal proteins | 8031360 | 4001513 | SCOP2 (2022-06-29) |
C [auth A] | SCOP2 Superfamily | L30e-like | 8043738 | 3001739 | SCOP2 (2022-06-29) |
D [auth B] | SCOP2 Family | Nop domain | 8020925 | 4003814 | SCOP2 (2022-06-29) |
D [auth B] | SCOP2 Superfamily | Nop domain | 8033305 | 3001551 | SCOP2 (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Nop domain | 8033305 | 3001551 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth D] | PF01248 | e2ozbD1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: PF01248 | ECOD (1.6) |
C [auth A] | PF01248 | e2ozbA1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: PF01248 | ECOD (1.6) |
D [auth B] | PF01798 | e2ozbB2 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: Nop C-terminal domain | F: PF01798 | ECOD (1.6) |
D [auth B] | PF01798 | e2ozbB3 | A: alpha complex topology | X: Nop N-terminal domain (From Topology) | H: Nop N-terminal domain (From Topology) | T: Nop N-terminal domain | F: PF01798 | ECOD (1.6) |
F [auth E] | PF01798 | e2ozbE1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: Nop C-terminal domain | F: PF01798 | ECOD (1.6) |
F [auth E] | PF01798 | e2ozbE2 | A: alpha complex topology | X: Nop N-terminal domain (From Topology) | H: Nop N-terminal domain (From Topology) | T: Nop N-terminal domain | F: PF01798 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth D] | 3.30.1330.30 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
C [auth A] | 3.30.1330.30 | Alpha Beta | 2-Layer Sandwich | 60s Ribosomal Protein L30 | Chain: A | CATH (4.3.0) |
D [auth B] | 1.10.287.4070 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
D [auth B] | 1.10.246.90 | Mainly Alpha | Orthogonal Bundle | Serum Albumin | Chain A, Domain 1 | CATH (4.3.0) |
F [auth E] | 1.10.287.4070 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
F [auth E] | 1.10.246.90 | Mainly Alpha | Orthogonal Bundle | Serum Albumin | Chain A, Domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], E [auth D] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
D [auth B], F [auth E] | PF01798 | snoRNA binding domain, fibrillarin (Nop) | snoRNA binding domain, fibrillarin | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], E [auth D] | IPR002415 | H/ACA ribonucleoprotein complex, subunit Nhp2-like | Family |
C [auth A], E [auth D] | IPR029064 | Ribosomal protein eL30-like superfamily | Homologous Superfamily |
C [auth A], E [auth D] | IPR018492 | Ribosomal protein eL8/Nhp2 family | Family |
C [auth A], E [auth D] | IPR004038 | Ribosomal protein eL8/eL30/eS12/Gadd45 | Domain |
C [auth A], E [auth D] | IPR004037 | Large ribosomal subunit protein eL8-like, conserved site | Conserved Site |
D [auth B], F [auth E] | IPR042239 | Nop, C-terminal domain | Homologous Superfamily |
D [auth B], F [auth E] | IPR019175 | Prp31 C-terminal | Domain |
D [auth B], F [auth E] | IPR002687 | Nop domain | Domain |
D [auth B], F [auth E] | IPR012976 | NOSIC | Domain |
D [auth B], F [auth E] | IPR027105 | U4/U6 small nuclear ribonucleoprotein Prp31 | Family |
D [auth B], F [auth E] | IPR036070 | Nop domain superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
C [auth A], E [auth D] | P55769 | : |
D [auth B], F [auth E] | Q8WWY3 | :