2OFY

Crystal structure of putative XRE-family transcriptional regulator from Rhodococcus sp.

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2ofya1 All alpha proteins lambda repressor-like DNA-binding domains lambda repressor-like DNA-binding domains SinR domain-like Putative transcriptional regulator RHA1_ro04071 (Rhodococcus jostii RHA1 ) [TaxId: 101510 ], SCOPe (2.08)
Bd2ofyb_ All alpha proteins lambda repressor-like DNA-binding domains lambda repressor-like DNA-binding domains SinR domain-like Putative transcriptional regulator RHA1_ro04071 (Rhodococcus jostii RHA1 ) [TaxId: 101510 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilySinR domain-like8022696 4000896 SCOP2 (2022-06-29)
ASCOP2 Superfamilylambda C1 repressor DNA-binding domain-like8035076 3000119 SCOP2 (2022-06-29)
BSCOP2B Superfamilylambda C1 repressor DNA-binding domain-like8035076 3000119 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF13560e2ofyA1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: PF13560ECOD (1.6)
BPF01381e2ofyB1 A: alpha arraysX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: PF01381ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.260.40 Mainly Alpha Orthogonal Bundle 434 Repressor (Amino-terminal Domain) lambda repressor-like DNA-binding domainsCATH (4.3.0)
B1.10.260.40 Mainly Alpha Orthogonal Bundle 434 Repressor (Amino-terminal Domain) lambda repressor-like DNA-binding domainsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13560Helix-turn-helix domain (HTH_31)Helix-turn-helix domainThis domain is a helix-turn-helix domain that probably binds to DNA.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Putative XRE-family transcriptional regulator - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR001387Cro/C1-type helix-turn-helix domainDomain
A, B
IPR010982Lambda repressor-like, DNA-binding domain superfamilyHomologous Superfamily