2OAR | pdb_00002oar

Mechanosensitive Channel of Large Conductance (MscL)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2oara1	Membrane and cell surface proteins and peptides	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	(Mycobacterium tuberculosis H37Ra ) [TaxId: 419947 ],	SCOPe (2.08)
C	d2oarc1	Membrane and cell surface proteins and peptides	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	(Mycobacterium tuberculosis H37Ra ) [TaxId: 419947 ],	SCOPe (2.08)
D	d2oard1	Membrane and cell surface proteins and peptides	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	(Mycobacterium tuberculosis H37Ra ) [TaxId: 419947 ],	SCOPe (2.08)
E	d2oare1	Membrane and cell surface proteins and peptides	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	(Mycobacterium tuberculosis H37Ra ) [TaxId: 419947 ],	SCOPe (2.08)
B	d2oarb1	Membrane and cell surface proteins and peptides	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	Gated mechanosensitive channel	(Mycobacterium tuberculosis H37Ra ) [TaxId: 419947 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Gated mechanosensitive channel	8031067	4001874	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Gated mechanosensitive channel	8043445	3000492	SCOP2 (2022-06-29)
C	SCOP2B Superfamily	Gated mechanosensitive channel	8043445	3000492	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Gated mechanosensitive channel	8043445	3000492	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Gated mechanosensitive channel	8043445	3000492	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Gated mechanosensitive channel	8043445	3000492	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MscL	e2oarA1	A: extended segments	X: Gated mechanosensitive channel (From Topology)	H: Gated mechanosensitive channel (From Topology)	T: Gated mechanosensitive channel	F: MscL	ECOD (1.6)
C	MscL	e2oarC1	A: extended segments	X: Gated mechanosensitive channel (From Topology)	H: Gated mechanosensitive channel (From Topology)	T: Gated mechanosensitive channel	F: MscL	ECOD (1.6)
D	MscL	e2oarD1	A: extended segments	X: Gated mechanosensitive channel (From Topology)	H: Gated mechanosensitive channel (From Topology)	T: Gated mechanosensitive channel	F: MscL	ECOD (1.6)
E	MscL	e2oarE1	A: extended segments	X: Gated mechanosensitive channel (From Topology)	H: Gated mechanosensitive channel (From Topology)	T: Gated mechanosensitive channel	F: MscL	ECOD (1.6)
B	MscL	e2oarB1	A: extended segments	X: Gated mechanosensitive channel (From Topology)	H: Gated mechanosensitive channel (From Topology)	T: Gated mechanosensitive channel	F: MscL	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.1200.120	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)
A	1.20.5.220	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
C	1.10.1200.120	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)
C	1.20.5.220	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
D	1.10.1200.120	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)
E	1.10.1200.120	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)
E	1.20.5.220	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
B	1.10.1200.120	Mainly Alpha	Orthogonal Bundle	Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF01741	Large-conductance mechanosensitive channel, MscL (MscL)	Large-conductance mechanosensitive channel, MscL		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Large-conductance mechanosensitive channel	passive transmembrane transporter activity gated channel activity monoatomic ion channel activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity mechanosensitive monoatomic ion channel activity	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR037673	Large-conductance mechanosensitive channel/anditomin synthesis protein L	Family
A, B, C, D, E	IPR036019	Large-conductance mechanosensitive channel MscL	Homologous Superfamily
A, B, C, D, E	IPR001185	Large-conductance mechanosensitive channel	Family
A, B, C, D, E	IPR019823	Large-conductance mechanosensitive channel, conserved site	Conserved Site

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E	OPM	Transmembrane	Alpha-helical polytopic	Large conductance mechanosensitive ion channel (MscL)	Large conductance mechanosensitive ion channel (MscL)

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D, E	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Channels: Mechanosensitive	MscL Mechanosensitive channel

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.