H98Q mutant of the homing endonuclease I-PPOI complexed with DNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth B] | d2o6mb_ | Alpha and beta proteins (a+b) | His-Me finger endonucleases | His-Me finger endonucleases | Intron-encoded homing endonucleases | Intron-encoded homing endonuclease I-PpoI | (Badhamia polycephala ) [TaxId: 5791 ], | SCOPe (2.08) |
| C [auth A] | d2o6ma_ | Alpha and beta proteins (a+b) | His-Me finger endonucleases | His-Me finger endonucleases | Intron-encoded homing endonucleases | Intron-encoded homing endonuclease I-PpoI | (Badhamia polycephala ) [TaxId: 5791 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D [auth B] | SCOP2B Superfamily | His-Me finger endonucleases | 8034097 | 3001893 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | His-Me finger endonucleases | 8034097 | 3001893 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth B] | Rpf1_C | e2o6mB1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, lambda repressor-like | F: Rpf1_C | ECOD (v295.2) |
| C [auth A] | HTH_3 | e2o6mA1 | A: alpha arrays | X: Profilin-like | H: sensor domains | T: sensor domains | F: HTH_3 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D [auth B] | 3.90.75.10 | Alpha Beta | Alpha-Beta Complex | Homing Intron 3 (I-Ppo) Encoded Endonuclease | Chain A | CATH (4.3.0) |
| C [auth A] | 3.90.75.10 | Alpha Beta | Alpha-Beta Complex | Homing Intron 3 (I-Ppo) Encoded Endonuclease | Chain A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| C [auth A], D [auth B] | Intron-encoded endonuclease I-PpoI | - | - | |
| A [auth C], B [auth D] | 5'-D(*DTP*DTP*DGP*DAP*DCP*DTP*DCP*DTP*DCP*DTP*DTP*DAP*DAP*DGP*DAP*DGP*DAP*DGP*DTP*DCP*DA)-3' | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth A], D [auth B] | IPR008704 | Zinc-binding loop region of homing endonuclease | Domain |
| C [auth A], D [auth B] | IPR044930 | Homing endonuclease, His-Me finger superfamily | Homologous Superfamily |
| C [auth A], D [auth B] | IPR044925 | His-Me finger superfamily | Homologous Superfamily |