2O6F | pdb_00002o6f

Structure of metal- free rTp34 from Treponema pallidum

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2o6fb_	All beta proteins	Immunoglobulin-like beta-sandwich	Membrane antigen precursor-like	Membrane antigen precursor-like	Tp34 lipoprotein	(Treponema pallidum ) [TaxId: 160 ],	SCOPe (2.08)
A	d2o6fa_	All beta proteins	Immunoglobulin-like beta-sandwich	Membrane antigen precursor-like	Membrane antigen precursor-like	Tp34 lipoprotein	(Treponema pallidum ) [TaxId: 160 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2 Family	Tp34-like	8045279	4004388	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Tp34-like	8089947	3002404	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	Tp34-like	8089947	3002404	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Sigma70_r4_2	e2o6fB1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Sigma70_r4_2	ECOD (develop294)
A	Sigma70_r4_2	e2o6fA1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Sigma70_r4_2	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.40.2480	Mainly Beta	Sandwich	Immunoglobulin-like	Periplasmic metal-binding protein Tp34-type	CATH (4.3.0)
A	2.60.40.2480	Mainly Beta	Sandwich	Immunoglobulin-like	Periplasmic metal-binding protein Tp34-type	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	34 kDa membrane antigen	-	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR038482	Periplasmic metal-binding protein Tp34-type superfamily	Homologous Superfamily
A, B	IPR018470	Periplasmic metal-binding protein Tp34-type	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.