2O2Z | pdb_00002o2z

Crystal structure of a protein member of the upf0052 family (bh3568) from bacillus halodurans at 2.60 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2o2zd_	Alpha and beta proteins (a/b)	CofD-like	CofD-like	CofD-like	automated matches	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
C	d2o2zc_	Alpha and beta proteins (a/b)	CofD-like	CofD-like	CofD-like	automated matches	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
B	d2o2zb_	Alpha and beta proteins (a/b)	CofD-like	CofD-like	CofD-like	automated matches	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
A	d2o2za1	Alpha and beta proteins (a/b)	CofD-like	CofD-like	CofD-like	automated matches	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
A	d2o2za2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	CofD-like	8042507	3001842	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CofD-like	8042507	3001842	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CofD-like	8042507	3001842	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	CofD-like	8042507	3001842	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D		e2o2zD1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: Sigma70_r4_2	F:	ECOD (20:10:01)
C		e2o2zC1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: Sigma70_r4_2	F:	ECOD (20:10:01)
B		e2o2zB1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: Sigma70_r4_2	F:	ECOD (20:10:01)
A		e2o2zA1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: Sigma70_r4_2	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.50.10680	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CofD-like domains	CATH (4.3.0)
C	3.40.50.10680	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CofD-like domains	CATH (4.3.0)
B	3.40.50.10680	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CofD-like domains	CATH (4.3.0)
A	3.40.50.10680	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	CofD-like domains	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01933	2-phospho-L-lactate transferase CofD (CofD)	2-phospho-L-lactate transferase CofD	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	hypothetical protein	LPPG:FO 2-phospho-L-lactate transferase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups	developmental process regulation of biological process regulation of developmental process biological regulation regulation of cell shape cell morphogenesis regulation of cell morphogenesis anatomical structure morphogenesis anatomical structure development regulation of biological quality regulation of anatomical structure morphogenesis	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR038136	CofD-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR002882	2-phospho-L-lactate transferase CofD	Family
A, B, C, D	IPR010119	Gluconeogenesis factor	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.