2NPT

Crystal Structure of the complex of human mitogen activated protein kinase kinase 5 phox domain (MAP2K5-phox) with human mitogen activated protein kinase kinase kinase 2 phox domain (MAP3K2-phox)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2npta1	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	CAD & PB1 domains	PB1 domain	Mitogen activated protein kinase kinase 5, Map2k5	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2npta2	Artifacts	Tags	Tags	Tags	N-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C	d2nptc2	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	CAD & PB1 domains	PB1 domain	Mitogen activated protein kinase kinase 5, Map2k5	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C	d2nptc3	Artifacts	Tags	Tags	Tags	N-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d2nptb1	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	CAD & PB1 domains	PB1 domain	Mitogen-activated protein kinase kinase kinase 2, MEKK 2	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
D	d2nptd_	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	CAD & PB1 domains	PB1 domain	Mitogen-activated protein kinase kinase kinase 2, MEKK 2	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	CAD & PB1 domains	8043177	3000318	SCOP2B (2022-06-29)
C	SCOP2 Family	PB1 domain	8030798	4003488	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	CAD & PB1 domains	8043177	3000318	SCOP2 (2022-06-29)
B	SCOP2 Family	PB1 domain	8030799	4003488	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	CAD & PB1 domains	8043178	3000318	SCOP2 (2022-06-29)
D	SCOP2B Superfamily	CAD & PB1 domains	8043178	3000318	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PB1	e2nptA1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PB1	ECOD (1.6)
C	PB1	e2nptC1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PB1	ECOD (1.6)
B	PB1	e2nptB1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PB1	ECOD (1.6)
D	PB1	e2nptD1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PB1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.3.0)
C	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.3.0)
B	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.3.0)
D	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C	PF00564	PB1 domain (PB1)	PB1 domain	-	Domain
B, D	PF00564	PB1 domain (PB1)	PB1 domain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C	Dual specificity mitogen-activated protein kinase kinase 5	catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein serine/threonine kinase activity MAP kinase kinase activity protein serine/threonine/tyrosine kinase activity cation binding metal ion binding	regulation of biological process regulation of growth regulation of cellular process regulation of cellular component organization positive regulation of biological process biological regulation growth positive regulation of cell growth regulation of cell growth cell growth cellular component organization positive regulation of growth cellular process cellular component organization or biogenesis regulation of biological process regulation of growth regulation of cellular process regulation of cellular component organization positive regulation of biological process biological regulation growth positive regulation of cell growth regulation of cell growth cell growth cellular component organization positive regulation of growth cellular process cellular component organization or biogenesis positive regulation of cellular process organonitrogen compound metabolic process positive regulation of protein metabolic process regulation of protein metabolic process primary metabolic process regulation of macromolecule metabolic process regulation of primary metabolic process positive regulation of metabolic process organic substance metabolic process metabolic process positive regulation of macromolecule metabolic process protein metabolic process macromolecule metabolic process regulation of metabolic process developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development negative regulation of hydrolase activity negative regulation of proteolysis regulation of catalytic activity negative regulation of biological process negative regulation of catalytic activity regulation of programmed cell death negative regulation of endopeptidase activity negative regulation of peptidase activity regulation of cysteine-type endopeptidase activity involved in apoptotic process regulation of proteolysis proteolysis regulation of endopeptidase activity negative regulation of cellular process negative regulation of cysteine-type endopeptidase activity involved in apoptotic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of cysteine-type endopeptidase activity negative regulation of programmed cell death regulation of apoptotic process negative regulation of metabolic process regulation of peptidase activity negative regulation of molecular function cell death regulation of molecular function negative regulation of apoptotic process regulation of hydrolase activity negative regulation of cysteine-type endopeptidase activity apoptotic process programmed cell death cellular response to stimulus negative regulation of extrinsic apoptotic signaling pathway in absence of ligand response to stimulus signal transduction in absence of ligand negative regulation of signaling signaling regulation of signal transduction negative regulation of cell communication extrinsic apoptotic signaling pathway negative regulation of signal transduction in absence of ligand cell communication negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway extrinsic apoptotic signaling pathway in absence of ligand signal transduction regulation of signaling cell surface receptor signaling pathway negative regulation of response to stimulus negative regulation of signal transduction regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway regulation of response to stimulus regulation of extrinsic apoptotic signaling pathway in absence of ligand regulation of cell communication regulation of apoptotic signaling pathway cell population proliferation positive regulation of cell population proliferation positive regulation of epithelial cell proliferation regulation of cell population proliferation regulation of epithelial cell proliferation epithelial cell proliferation insulin-like growth factor receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway enzyme-linked receptor protein signaling pathway embryo development negative regulation of cell adhesion regulation of cell-cell adhesion involved in gastrulation heterotypic cell-cell adhesion cell adhesion cell-cell adhesion regulation of cell-cell adhesion regulation of heterotypic cell-cell adhesion cell-cell adhesion via plasma-membrane adhesion molecules cell-cell adhesion involved in gastrulation regulation of cell adhesion embryonic morphogenesis gastrulation anatomical structure morphogenesis negative regulation of heterotypic cell-cell adhesion negative regulation of cell-cell adhesion cellular biosynthetic process negative regulation of DNA-binding transcription factor activity RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process negative regulation of NF-kappaB transcription factor activity nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process organic substance biosynthetic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process organic cyclic compound metabolic process regulation of gene expression biosynthetic process regulation of DNA-binding transcription factor activity organic cyclic compound biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription intracellular signal transduction intracellular signaling cassette MAPK cascade response to laminar fluid shear stress cellular response to stress response to stress cellular response to laminar fluid shear stress response to fluid shear stress cellular response to fluid shear stress chemokine (C-X-C motif) ligand 2 production negative regulation of chemokine production negative regulation of cellular metabolic process regulation of chemokine (C-X-C motif) ligand 2 production regulation of cytokine production cytokine production regulation of multicellular organismal process negative regulation of cytokine production regulation of chemokine production negative regulation of cellular biosynthetic process negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process chemokine production negative regulation of multicellular organismal process negative regulation of chemokine (C-X-C motif) ligand 2 production positive regulation of cell communication positive regulation of signal transduction positive regulation of phosphorylation regulation of transferase activity positive regulation of phosphate metabolic process regulation of MAP kinase activity positive regulation of protein serine/threonine kinase activity regulation of phosphate metabolic process phosphate-containing compound metabolic process phosphorus metabolic process protein modification process positive regulation of protein phosphorylation positive regulation of MAP kinase activity protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade positive regulation of kinase activity regulation of kinase activity regulation of protein serine/threonine kinase activity macromolecule modification regulation of phosphorus metabolic process regulation of protein modification process regulation of protein phosphorylation positive regulation of cellular metabolic process positive regulation of response to stimulus positive regulation of molecular function positive regulation of protein modification process regulation of intracellular signal transduction positive regulation of protein kinase activity positive regulation of transferase activity positive regulation of catalytic activity regulation of protein kinase activity regulation of phosphorylation positive regulation of signaling ERK5 cascade cellular response to endogenous stimulus cellular response to growth factor stimulus response to endogenous stimulus response to growth factor negative regulation of locomotion regulation of cell motility cell migration involved in sprouting angiogenesis regulation of blood vessel endothelial cell migration endothelial cell migration negative regulation of endothelial cell migration negative regulation of blood vessel endothelial cell migration tube morphogenesis tissue migration negative regulation of epithelial cell migration blood vessel endothelial cell migration cell migration negative regulation of cell migration blood vessel development blood vessel morphogenesis regulation of cell migration involved in sprouting angiogenesis vasculature development epithelium migration regulation of locomotion negative regulation of cell motility negative regulation of cell migration involved in sprouting angiogenesis angiogenesis ameboidal-type cell migration regulation of cell migration regulation of endothelial cell migration epithelial cell migration cell motility regulation of epithelial cell migration locomotion tube development sprouting angiogenesis anatomical structure formation involved in morphogenesis response to organic substance response to cytokine regulation of response to cytokine stimulus negative regulation of response to cytokine stimulus response to chemical negative regulation of interleukin-8 production interleukin-8 production regulation of interleukin-8 production negative regulation of RNA biosynthetic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of RNA metabolic process positive regulation of macromolecule biosynthetic process positive regulation of nucleobase-containing compound metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of biosynthetic process positive regulation of RNA biosynthetic process positive regulation of cellular biosynthetic process muscle cell apoptotic process smooth muscle cell apoptotic process regulation of muscle cell apoptotic process regulation of smooth muscle cell apoptotic process negative regulation of smooth muscle cell apoptotic process negative regulation of muscle cell apoptotic process	intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle intracellular non-membrane-bounded organelle cellular anatomical entity microtubule cytoskeleton non-membrane-bounded organelle
B, D	Mitogen-activated protein kinase kinase kinase 2	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein binding kinase binding enzyme binding protein kinase binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein serine/threonine kinase activity MAP kinase kinase kinase activity cation binding metal ion binding protein serine kinase activity	cellular response to stimulus response to stimulus response to mechanical stimulus response to external stimulus response to abiotic stimulus cellular process cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus phosphorylation cellular metabolic process phosphate-containing compound metabolic process metabolic process cellular response to stimulus response to stimulus response to mechanical stimulus response to external stimulus response to abiotic stimulus cellular process cellular response to mechanical stimulus cellular response to abiotic stimulus cellular response to external stimulus cellular response to environmental stimulus phosphorylation cellular metabolic process phosphate-containing compound metabolic process metabolic process phosphorus metabolic process regulation of biological process regulation of cellular process signaling biological regulation signal transduction intracellular signal transduction cell communication	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR017441	Protein kinase, ATP binding site	Binding Site
A, C	IPR000270	PB1 domain	Domain
A, C	IPR034851	Dual specificity mitogen-activated protein kinase kinase 5, PB1 domain	Domain
A, C	IPR000719	Protein kinase domain	Domain
A, C	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, C	IPR008271	Serine/threonine-protein kinase, active site	Active Site
B, D	IPR017441	Protein kinase, ATP binding site	Binding Site
B, D	IPR034879	Mitogen-activated protein kinase kinase kinase 2/3, PB1 domain	Domain
B, D	IPR000270	PB1 domain	Domain
B, D	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
B, D	IPR000719	Protein kinase domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, C	Pharos: Q13163	restless legs syndrome amphetamine abuse Body Weight tuberculosis attention deficit hyperactivity disorder, inattentive type colorectal cancer idiopathic pulmonary fibrosis non-small cell lung carcinoma bipolar disorder depressive disorder osteosarcoma diabetes mellitus interstitial lung disease
B, D	Pharos: Q9Y2U5	ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia rheumatoid arthritis acute myeloid leukemia Blastic phase chronic myeloid leukemia glioblastoma interstitial lung disease lung large cell carcinoma malignant pancreatic neoplasm non-small cell lung carcinoma pancreatic ductal adenocarcinoma Pick disease tuberculosis astrocytic tumor idiopathic pulmonary fibrosis ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia rheumatoid arthritis acute myeloid leukemia Blastic phase chronic myeloid leukemia glioblastoma interstitial lung disease lung large cell carcinoma malignant pancreatic neoplasm non-small cell lung carcinoma pancreatic ductal adenocarcinoma Pick disease tuberculosis astrocytic tumor idiopathic pulmonary fibrosis juvenile dermatomyositis malignant ependymoma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm primitive neuroectodermal tumor atypical teratoid rhabdoid tumor diabetes mellitus large cell medulloblastoma malignant glioma myopathy

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.