2M3X | pdb_00002m3x

Solution structure of Ph1500: a homohexameric protein centered on a 12-bladed beta-propeller

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EUF07857	e2m3xA1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 12-bladed	F: EUF07857	ECOD (1.6)
A	UNK_F_TYPE	e2m3xA2	A: a+b two layers	X: Cdc48 domain 2-like (From Topology)	H: Cdc48 domain 2-like (From Topology)	T: Cdc48 domain 2-like	F: UNK_F_TYPE	ECOD (1.6)
B	EUF07857	e2m3xB1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 12-bladed	F: EUF07857	ECOD (1.6)
B	UNK_F_TYPE	e2m3xB2	A: a+b two layers	X: Cdc48 domain 2-like (From Topology)	H: Cdc48 domain 2-like (From Topology)	T: Cdc48 domain 2-like	F: UNK_F_TYPE	ECOD (1.6)
C	EUF07857	e2m3xC1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 12-bladed	F: EUF07857	ECOD (1.6)
C	UNK_F_TYPE	e2m3xC2	A: a+b two layers	X: Cdc48 domain 2-like (From Topology)	H: Cdc48 domain 2-like (From Topology)	T: Cdc48 domain 2-like	F: UNK_F_TYPE	ECOD (1.6)
D	EUF07857	e2m3xD1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 12-bladed	F: EUF07857	ECOD (1.6)
D	UNK_F_TYPE	e2m3xD2	A: a+b two layers	X: Cdc48 domain 2-like (From Topology)	H: Cdc48 domain 2-like (From Topology)	T: Cdc48 domain 2-like	F: UNK_F_TYPE	ECOD (1.6)
E	EUF07857	e2m3xE1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 12-bladed	F: EUF07857	ECOD (1.6)
E	UNK_F_TYPE	e2m3xE2	A: a+b two layers	X: Cdc48 domain 2-like (From Topology)	H: Cdc48 domain 2-like (From Topology)	T: Cdc48 domain 2-like	F: UNK_F_TYPE	ECOD (1.6)
F	EUF07857	e2m3xF1	A: beta duplicates or obligate multimers	X: beta-propeller-like	H: beta-propeller	T: 12-bladed	F: EUF07857	ECOD (1.6)
F	UNK_F_TYPE	e2m3xF2	A: a+b two layers	X: Cdc48 domain 2-like (From Topology)	H: Cdc48 domain 2-like (From Topology)	T: Cdc48 domain 2-like	F: UNK_F_TYPE	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.330.10	Alpha Beta	Roll	Vcp-like ATPase	Chain A, domain 2	CATH (4.3.0)
A	2.40.10.360	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
B	3.10.330.10	Alpha Beta	Roll	Vcp-like ATPase	Chain A, domain 2	CATH (4.3.0)
B	2.40.10.360	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
C	3.10.330.10	Alpha Beta	Roll	Vcp-like ATPase	Chain A, domain 2	CATH (4.3.0)
C	2.40.10.360	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
D	3.10.330.10	Alpha Beta	Roll	Vcp-like ATPase	Chain A, domain 2	CATH (4.3.0)
D	2.40.10.360	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
E	3.10.330.10	Alpha Beta	Roll	Vcp-like ATPase	Chain A, domain 2	CATH (4.3.0)
E	2.40.10.360	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)
F	3.10.330.10	Alpha Beta	Roll	Vcp-like ATPase	Chain A, domain 2	CATH (4.3.0)
F	2.40.10.360	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	PH1500	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR029067	CDC48 domain 2-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR004201	CDC48, domain 2	Domain
A, B, C, D, E A, B, C, D, E, F	IPR049295	Domain of unknown function DUF6849	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.