2LZ1 | pdb_00002lz1

Solution NMR Structure of the DNA-Binding Domain of Human NF-E2-Related Factor 2, Northeast Structural Genomics Consortium (NESG) Target HR3520O

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	A DNA-binding domain in eukaryotic transcription factors	8080280	4000910	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	A DNA-binding domain in eukaryotic transcription factors	8080281	3001953	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	NikR_C	e2lz1A2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: NikR_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.880.10	Mainly Alpha	Orthogonal Bundle	Transcription Factor Skn-1	Chain P	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF03131	bZIP Maf transcription factor (bZIP_Maf)	bZIP Maf transcription factor	-	Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Nuclear factor erythroid 2-related factor 2	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription factor binding transcription coregulator binding protein binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription factor binding transcription coregulator binding protein binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity protein domain specific binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular condensate scaffold activity protein-macromolecule adaptor activity molecular adaptor activity	regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process response to stimulus response to stress response to ischemia cellular response to stimulus cellular response to nutrient levels response to nutrient levels cellular response to stress response to starvation cellular response to glucose starvation cellular response to starvation response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus response to hypoxia response to chemical response to oxygen levels response to abiotic stimulus catabolic process proteasomal protein catabolic process primary metabolic process protein catabolic process protein metabolic process proteasomal ubiquitin-independent protein catabolic process macromolecule catabolic process protein ubiquitination macromolecule modification post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal developmental process multicellular organismal process cellular developmental process hemopoiesis cell activation cell development mononuclear cell differentiation lymphocyte activation lymphocyte differentiation leukocyte activation T cell activation immune system process cell differentiation anatomical structure development T cell differentiation leukocyte differentiation response to oxidative stress cellular response to oxidative stress cellular response to chemical stress regulation of cellular response to hypoxia negative regulation of biological process regulation of cellular response to stress regulation of response to stress negative regulation of cellular process negative regulation of response to stimulus negative regulation of cellular response to hypoxia regulation of response to stimulus response to caloric restriction regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cell projection organization neuron projection development cellular component organization neurogenesis multicellular organism development neuron differentiation positive regulation of neuron projection development positive regulation of cell projection organization cellular component organization or biogenesis system development plasma membrane bounded cell projection organization regulation of cell projection organization nervous system development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization response to fluid shear stress cellular response to fluid shear stress cell redox homeostasis cellular homeostasis homeostatic process negative regulation of cardiac muscle cell apoptotic process muscle cell apoptotic process negative regulation of programmed cell death regulation of apoptotic process regulation of cardiac muscle cell apoptotic process regulation of muscle cell apoptotic process regulation of programmed cell death cell death cardiac muscle cell apoptotic process negative regulation of apoptotic process regulation of striated muscle cell apoptotic process striated muscle cell apoptotic process negative regulation of muscle cell apoptotic process negative regulation of striated muscle cell apoptotic process apoptotic process programmed cell death regulation of body fluid levels positive regulation of coagulation regulation of response to external stimulus positive regulation of blood coagulation regulation of response to wounding regulation of coagulation positive regulation of response to stimulus coagulation regulation of multicellular organismal process positive regulation of hemostasis regulation of biological quality response to wounding regulation of hemostasis positive regulation of response to wounding wound healing regulation of blood coagulation hemostasis response to external stimulus blood coagulation positive regulation of wound healing regulation of wound healing positive regulation of multicellular organismal process cellular response to xenobiotic stimulus response to xenobiotic stimulus signaling integrated stress response signaling intracellular signal transduction cell communication intracellular signaling cassette signal transduction positive regulation of DNA-templated transcription RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription cellular response to topologically incorrect protein endoplasmic reticulum unfolded protein response cellular response to unfolded protein response to unfolded protein response to topologically incorrect protein response to endoplasmic reticulum stress aflatoxin metabolic process detoxification aflatoxin catabolic process mycotoxin catabolic process secondary metabolic process response to toxic substance mycotoxin metabolic process toxin catabolic process toxin metabolic process reactive oxygen species metabolic process regulation of cellular response to oxidative stress response to superoxide cellular oxidant detoxification cellular response to oxygen radical cellular response to reactive oxygen species regulation of response to oxidative stress cellular detoxification response to oxygen-containing compound regulation of superoxide metabolic process cellular response to oxygen-containing compound response to reactive oxygen species regulation of removal of superoxide radicals superoxide metabolic process removal of superoxide radicals regulation of response to reactive oxygen species cellular response to superoxide regulation of reactive oxygen species metabolic process cellular response to toxic substance response to oxygen radical positive regulation of protein metabolic process regulation of ubiquitin-dependent protein catabolic process positive regulation of ubiquitin-dependent protein catabolic process modification-dependent macromolecule catabolic process regulation of protein metabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process regulation of protein catabolic process digestive system development tube development digestive tract development response to sodium arsenite response to arsenic-containing substance response to salt regulation of vascular associated smooth muscle cell migration negative regulation of locomotion vascular associated smooth muscle cell migration regulation of cell motility negative regulation of vascular associated smooth muscle cell migration regulation of smooth muscle cell migration smooth muscle cell migration muscle cell migration negative regulation of smooth muscle cell migration regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility locomotion negative regulation of cell migration negative regulation of stem cell differentiation negative regulation of hematopoietic progenitor cell differentiation regulation of developmental process regulation of cell differentiation regulation of stem cell differentiation hematopoietic stem cell differentiation negative regulation of hematopoietic stem cell differentiation negative regulation of cell differentiation regulation of hematopoietic progenitor cell differentiation negative regulation of developmental process regulation of hematopoietic stem cell differentiation stem cell differentiation hematopoietic progenitor cell differentiation negative regulation of ferroptosis regulation of ferroptosis ferroptosis proteasome-mediated ubiquitin-dependent protein catabolic process positive regulation of reactive oxygen species metabolic process response to copper ion cellular response to metal ion response to metal ion cellular response to copper ion PERK-mediated unfolded protein response ER-nucleus signaling pathway cellular response to hydrogen peroxide response to hydrogen peroxide response to peptide cellular response to tumor necrosis factor response to cytokine cellular response to cytokine stimulus response to tumor necrosis factor regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms response to biotic stimulus innate immune response regulation of immune system process response to external biotic stimulus immune response response to other organism defense response regulation of innate immune response defense response to symbiont defense response to other organism regulation of immune response response to laminar fluid shear stress cellular response to laminar fluid shear stress positive regulation of locomotion regulation of blood vessel endothelial cell migration endothelial cell migration positive regulation of cell migration positive regulation of blood vessel endothelial cell migration positive regulation of endothelial cell migration positive regulation of cell motility blood vessel endothelial cell migration regulation of endothelial cell migration cellular response to methionine cellular response to acid chemical cellular response to nitrogen compound cellular response to amino acid stimulus response to nutrient response to nitrogen compound response to amino acid response to acid chemical response to methionine cellular response to nutrient intrinsic apoptotic signaling pathway in response to oxidative stress regulation of oxidative stress-induced intrinsic apoptotic signaling pathway negative regulation of signaling negative regulation of intracellular signal transduction regulation of signal transduction regulation of intrinsic apoptotic signaling pathway negative regulation of cell communication regulation of intracellular signal transduction negative regulation of apoptotic signaling pathway intrinsic apoptotic signaling pathway regulation of signaling negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway negative regulation of signal transduction apoptotic signaling pathway negative regulation of intrinsic apoptotic signaling pathway regulation of cell communication regulation of apoptotic signaling pathway angiogenesis regulation of vasculature development positive regulation of developmental process tube morphogenesis regulation of anatomical structure morphogenesis blood vessel development regulation of multicellular organismal development blood vessel morphogenesis positive regulation of angiogenesis vasculature development circulatory system development anatomical structure morphogenesis positive regulation of vasculature development regulation of angiogenesis anatomical structure formation involved in morphogenesis inflammatory response regulation of embryonic development embryo development negative regulation of endothelial cell apoptotic process endothelial cell apoptotic process regulation of endothelial cell apoptotic process regulation of localization import into cell hexose transmembrane transport regulation of D-glucose import across plasma membrane transport carbohydrate import across plasma membrane carbohydrate transport positive regulation of D-glucose transmembrane transport hexose import across plasma membrane localization positive regulation of transmembrane transport positive regulation of D-glucose import across plasma membrane regulation of transport import across plasma membrane establishment of localization transmembrane transport regulation of transmembrane transport D-glucose import across plasma membrane positive regulation of transport D-glucose transmembrane transport regulation of D-glucose transmembrane transport monosaccharide transmembrane transport carbohydrate transmembrane transport response to angiotensin response to endogenous stimulus response to peptide hormone cellular response to peptide hormone stimulus cellular response to angiotensin cellular response to endogenous stimulus response to hormone cellular response to hormone stimulus positive regulation of proteasomal protein catabolic process regulation of response to endoplasmic reticulum stress ERAD pathway positive regulation of response to endoplasmic reticulum stress regulation of ERAD pathway regulation of proteasomal protein catabolic process positive regulation of ERAD pathway glutathione metabolic process modified amino acid biosynthetic process positive regulation of glutathione biosynthetic process regulation of sulfur metabolic process sulfur compound metabolic process modified amino acid metabolic process regulation of glutathione biosynthetic process sulfur compound biosynthetic process peptide biosynthetic process glutathione biosynthetic process nonribosomal peptide biosynthetic process peptide metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle mediator complex membraneless organelle intracellular membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle mediator complex membraneless organelle intracellular membraneless organelle chromatin chromosome Golgi apparatus endomembrane system cilium plasma membrane bounded cell projection ciliary basal body cell projection microtubule organizing center cytoskeleton microtubule cytoskeleton RNA polymerase II transcription regulator complex transcription regulator complex centrosome cell periphery plasma membrane membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-DNA complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR004826	Basic leucine zipper domain, Maf-type	Domain
A	IPR004827	Basic-leucine zipper domain	Domain
A	IPR008917	Transcription factor, Skn-1-like, DNA-binding domain superfamily	Homologous Superfamily
A	IPR047167	Nuclear Factor Erythroid-derived 2-like	Family
A	IPR046347	Basic-leucine zipper domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q16236	esophageal squamous cell carcinoma squamous cell carcinoma prostate cancer skin neoplasm keratosis acute lung injury Vascular System Injuries allergic contact dermatitis cholestasis non-small cell lung carcinoma cirrhosis of liver hyperglycemia hyperplasia pulmonary fibrosis endometrial carcinoma esophageal squamous cell carcinoma squamous cell carcinoma prostate cancer skin neoplasm keratosis acute lung injury Vascular System Injuries allergic contact dermatitis cholestasis non-small cell lung carcinoma cirrhosis of liver hyperglycemia hyperplasia pulmonary fibrosis endometrial carcinoma experimental autoimmune encephalomyelitis congestive heart failure pancreatic ductal adenocarcinoma primary ovarian failure skin cancer kidney disease liver cancer non-alcoholic fatty liver disease digestive system disease pulmonary emphysema drug-induced liver injury immunodeficiency, developmental delay, and hypohomocysteinemia endometrial cancer acute kidney failure lung adenocarcinoma myopathy glioblastoma head and neck squamous cell carcinoma ovarian cancer diabetic kidney disease primary biliary cholangitis inborn carbohydrate metabolic disorder toxic encephalopathy vitiligo fatty liver disease cancer gastric carcinoma hepatocellular carcinoma Down syndrome psoriasis idiopathic interstitial pneumonia tuberculosis extrahepatic cholestasis liver neoplasm neurodegenerative disease heart failure osteosarcoma dermatomyositis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.