2LY3 | pdb_00002ly3

Solution structure of TamA POTRA domain I

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth 1]	SCOP2B Superfamily	POTRA domain-like	8052259	3002100	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth 1]		e2ly311	A: Single-stranded left-handed beta-helix	X: Immunoglobulin-related	H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	T: Peptidase_M10	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 1]	PF17243	POTRA domain TamA domain 1 (POTRA_TamA_1)	POTRA domain TamA domain 1	This family represents the POTRA domain found in the membrane insertase TamA.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1]	Translocation and assembly module TamA	-	localization protein localization to cell periphery cellular localization macromolecule localization protein localization to outer membrane cellular process intracellular protein localization localization within membrane protein localization to membrane establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell localization protein localization to cell periphery cellular localization macromolecule localization protein localization to outer membrane cellular process intracellular protein localization localization within membrane protein localization to membrane establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region secretion by cell protein transport	protein-containing complex TAM protein secretion complex cell periphery cellular anatomical structure plasma membrane membrane cell outer membrane external encapsulating structure cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1]	IPR039910	Surface antigen D15-like	Family
A [auth 1]	IPR035243	TamA, POTRA domain 1	Domain
A [auth 1]	IPR034746	POTRA domain	Domain
A [auth 1]	IPR000184	Bacterial surface antigen (D15)	Domain
A [auth 1]	IPR010827	POTRA domain, BamA/TamA-like	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.