2LTQ | pdb_00002ltq

High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyDsbB-like 8033051 3001302 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyDsbB-like 8033051 3001302 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FRrf2e2ltqF1 A: alpha bundlesX: beta-GraspH: HTHT: winged helix domainF: Rrf2ECOD (develop294)
CRimKe2ltqC1 A: alpha bundlesX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: RimKECOD (develop294)
EV-sete2ltqE5 A: alpha bundlesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: V-setECOD (develop294)
BRimKe2ltqB1 A: alpha bundlesX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: RimKECOD (develop294)
DMelibiase_Ce2ltqD2 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: Melibiase_CECOD (develop294)
ARimKe2ltqA1 A: alpha bundlesX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: RimKECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
D1.20.1550.10 Mainly Alpha Up-down Bundle Bromodomain-like DsbB-likeCATH (4.3.0)
A1.20.1550.10 Mainly Alpha Up-down Bundle Bromodomain-like DsbB-likeCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
C, F
FAB FRAGMENT VH-CH1 Mus musculus (house mouse) IGHV5-12-1*01, IGHJ4*01, IGHG2A*01, IGHG2A*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-2A_KAPPA IMGT (202610-0)
B, E
FAB FRAGMENT L-KAPPA Mus musculus (house mouse) IGKV8-21*01, IGKJ1*02, IGKJ2*01, IGKC*01, IGKC*02 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-2A_KAPPA IMGT (202610-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C, F
Heavy ChainIGHV5 -disulfide bond formation protein bSAbDab (2026-03-20)
B, E
Light ChainIGKV8 Kappadisulfide bond formation protein bSAbDab (2026-03-20)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D
PF02600Disulfide bond formation protein DsbB (DsbB)Disulfide bond formation protein DsbB- Family

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Membrane Protein Annotation: mpstruc mpstruc Database Homepage