2LPZ | pdb_00002lpz

Atomic model of the Type-III Secretion System Needle


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
USCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyType III secretion system needle-like 8074333 3000649 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APK_Tyr_Ser-Thre2lpzA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: RIFT-relatedT: FMN-binding split barrel 2F: PK_Tyr_Ser-ThrECOD (v294.1)
AA [auth a]RRM_1e2lpza1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
BRRM_1e2lpzB1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
BA [auth b]RRM_1e2lpzb1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
CRRM_1e2lpzC1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
CA [auth c]RRM_1e2lpzc1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
DRRM_1e2lpzD1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
ERRM_1e2lpzE1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
FRRM_1e2lpzF1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
GRRM_1e2lpzG1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
HRRM_1e2lpzH1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
IRRM_1e2lpzI1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
JRRM_1e2lpzJ1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
KRRM_1e2lpzK1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
LRRM_1e2lpzL1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
MRRM_1e2lpzM1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
ORRM_1e2lpzO1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
PRRM_1e2lpzP1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
QRRM_1e2lpzQ1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
RRRM_1e2lpzR1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
SRRM_1e2lpzS1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
TRRM_1e2lpzT1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
VRRM_1e2lpzV1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
WRRM_1e2lpzW1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
XRRM_1e2lpzX1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
ZRRM_1e2lpzZ1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
YRRM_1e2lpzY1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
URRM_1e2lpzU1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
NRRM_1e2lpzN1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09392Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF- Family