2LD7
Solution structure of the mSin3A PAH3-SAP30 SID complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF13867 | e2ld7A1 | A: alpha arrays | X: LEM/SAP HeH motif-like | H: LEM/SAP HeH motif | T: LEM/SAP HeH motif | F: PF13867 | ECOD (1.6) |
B | PF02671 | e2ld7B1 | A: alpha bundles | X: PAH2 domain (From Topology) | H: PAH2 domain (From Topology) | T: PAH2 domain | F: PF02671 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 6.10.160.20 | Special | Helix non-globular | Transcription Termination Factor Rho, Rna-binding Domain | Chain A, Domain 1 | CATH (4.3.0) |
B | 1.20.1160.11 | Mainly Alpha | Up-down Bundle | Paired amphipathic helix 2 (pah2 repeat) | Paired amphipathic helix | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13866 | SAP30 zinc-finger (zf-SAP30) | SAP30 zinc-finger | SAP30 is a subunit of the histone deacetylase complex, and this domain is a zinc-finger. Solution of the structure shows a novel fold comprising two beta-strands and two alpha-helices with the zinc organising centre showing remote resemblance to the ... | Domain | |
PF13867 | Sin3 binding region of histone deacetylase complex subunit SAP30 (SAP30_Sin3_bdg) | Sin3 binding region of histone deacetylase complex subunit SAP30 | - | Family | |
PF02671 | Paired amphipathic helix repeat (PAH) | Paired amphipathic helix repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR038291 | SAP30, C-terminal domain superfamily | Homologous Superfamily | |
IPR025717 | Histone deacetylase complex subunit SAP30 zinc-finger | Domain | |
IPR025718 | Histone deacetylase complex subunit SAP30, Sin3 binding domain | Domain | |
IPR024145 | Histone deacetylase complex subunit SAP30/SAP30-like | Family | |
IPR013194 | Histone deacetylase interacting domain | Domain | |
IPR039774 | Transcriptional regulatory protein Sin3-like | Family | |
IPR003822 | Paired amphipathic helix | Repeat | |
IPR036600 | Paired amphipathic helix superfamily | Homologous Superfamily | |
IPR031693 | Sin3, C-terminal | Domain |