2J69 | pdb_00002j69

Bacterial dynamin-like protein BDLP

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Dynamin G domain-like	8019706	4004047	SCOP2 (2022-06-29)
A	SCOP2 Family	Dynamin stalk region-like	8019707	4004048	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Ras-like P-loop GTPases	8054373	3002022	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Dynamin stalk-like	8054374	3002023	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Ras-like P-loop GTPases	8054373	3002022	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Dynamin stalk-like	8054374	3002023	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Dynamin stalk-like	8054374	3002023	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ras-like P-loop GTPases	8054373	3002022	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ras-like P-loop GTPases	8054373	3002022	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Dynamin stalk-like	8054374	3002023	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	KOG0448_like	e2j69A1	A: alpha bundles	X: Bacterial dynamin-like protein helical domain (From Topology)	H: Bacterial dynamin-like protein helical domain (From Topology)	T: Bacterial dynamin-like protein helical domain	F: KOG0448_like	ECOD (1.6)
A	MnmE_helical_2nd	e2j69A2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
B	KOG0448_like	e2j69B1	A: alpha bundles	X: Bacterial dynamin-like protein helical domain (From Topology)	H: Bacterial dynamin-like protein helical domain (From Topology)	T: Bacterial dynamin-like protein helical domain	F: KOG0448_like	ECOD (1.6)
B	MnmE_helical_2nd	e2j69B2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
C	KOG0448_like	e2j69C1	A: alpha bundles	X: Bacterial dynamin-like protein helical domain (From Topology)	H: Bacterial dynamin-like protein helical domain (From Topology)	T: Bacterial dynamin-like protein helical domain	F: KOG0448_like	ECOD (1.6)
C	MnmE_helical_2nd	e2j69C2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)
D	KOG0448_like	e2j69D1	A: alpha bundles	X: Bacterial dynamin-like protein helical domain (From Topology)	H: Bacterial dynamin-like protein helical domain (From Topology)	T: Bacterial dynamin-like protein helical domain	F: KOG0448_like	ECOD (1.6)
D	MnmE_helical_2nd	e2j69D2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: MnmE_helical_2nd	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF21808	Bacterial dynamin-like protein, helical domain (Dynamin-like_hel_bact)	Bacterial dynamin-like protein, helical domain	This is the helical region from bacterial dynamin-like proteins which covers the middle and GED domains which mediate extensive protein-protein contacts [1,2]. These proteins are large GTPases with the same multidomain architecture that is found in d ...	This is the helical region from bacterial dynamin-like proteins which covers the middle and GED domains which mediate extensive protein-protein contacts [1,2]. These proteins are large GTPases with the same multidomain architecture that is found in dynamin-like proteins.	Domain
A, B, C, D	PF00350	Dynamin family (Dynamin_N)	Dynamin family		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	BACTERIAL DYNAMIN-LIKE PROTEIN	binding lipid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding binding lipid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity identical protein binding protein binding	organelle fusion cellular component organization organelle organization cellular process mitochondrial fusion cellular component organization or biogenesis mitochondrion organization	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR045063	Dynamin, N-terminal	Domain
A, B, C, D	IPR030381	Dynamin-type guanine nucleotide-binding (G) domain	Domain
A, B, C, D	IPR049399	BDLP-like, helical domain	Domain
A, B, C, D	IPR027094	Mitofusin family	Family
A, B, C, D	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D	OPM	Monotopic/peripheral	Alpha/Beta monotopic/peripheral	P-loop containing nucleoside triphosphate hydrolases	Dynamin

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.