2J58 | pdb_00002j58

The structure of Wza

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Poly_export	e2j58A1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Nqo1 middle domain-like	F: Poly_export	ECOD (v294.1)
A	SLBB_2	e2j58A2	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Nqo1 middle domain-like	F: SLBB_2	ECOD (v294.1)
A	CS	e2j58A4	A: a/b three-layered sandwiches	X: HSP20-like	H: HSP20-like chaperones	T: HSP20-like chaperones	F: CS	ECOD (v294.1)
B	MR_MLE_N	e2j58B1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: MR_MLE_N	ECOD (v294.1)
C	MR_MLE_N	e2j58C1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: MR_MLE_N	ECOD (v294.1)
D	MR_MLE_N	e2j58D1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: MR_MLE_N	ECOD (v294.1)
F	MR_MLE_N	e2j58F1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: MR_MLE_N	ECOD (v294.1)
G	MR_MLE_N	e2j58G1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: MR_MLE_N	ECOD (v294.1)
H	MR_MLE_N	e2j58H1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: MR_MLE_N	ECOD (v294.1)
E	MR_MLE_N	e2j58E1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: MR_MLE_N	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.560.10	Alpha Beta	Roll	Outer membrane lipoprotein wza fold like	Outer membrane lipoprotein wza domain like	CATH (4.3.0)
A	3.30.1950.10	Alpha Beta	2-Layer Sandwich	wza like fold	wza like domain	CATH (4.3.0)
A	1.20.5.70	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
B	3.10.560.10	Alpha Beta	Roll	Outer membrane lipoprotein wza fold like	Outer membrane lipoprotein wza domain like	CATH (4.3.0)
B	3.30.1950.10	Alpha Beta	2-Layer Sandwich	wza like fold	wza like domain	CATH (4.3.0)
B	1.20.5.70	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
C	3.10.560.10	Alpha Beta	Roll	Outer membrane lipoprotein wza fold like	Outer membrane lipoprotein wza domain like	CATH (4.3.0)
C	3.30.1950.10	Alpha Beta	2-Layer Sandwich	wza like fold	wza like domain	CATH (4.3.0)
C	1.20.5.70	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
D	3.10.560.10	Alpha Beta	Roll	Outer membrane lipoprotein wza fold like	Outer membrane lipoprotein wza domain like	CATH (4.3.0)
D	3.30.1950.10	Alpha Beta	2-Layer Sandwich	wza like fold	wza like domain	CATH (4.3.0)
D	1.20.5.70	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
F	3.10.560.10	Alpha Beta	Roll	Outer membrane lipoprotein wza fold like	Outer membrane lipoprotein wza domain like	CATH (4.3.0)
F	3.30.1950.10	Alpha Beta	2-Layer Sandwich	wza like fold	wza like domain	CATH (4.3.0)
F	1.20.5.70	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
G	3.10.560.10	Alpha Beta	Roll	Outer membrane lipoprotein wza fold like	Outer membrane lipoprotein wza domain like	CATH (4.3.0)
G	3.30.1950.10	Alpha Beta	2-Layer Sandwich	wza like fold	wza like domain	CATH (4.3.0)
G	1.20.5.70	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
H	3.10.560.10	Alpha Beta	Roll	Outer membrane lipoprotein wza fold like	Outer membrane lipoprotein wza domain like	CATH (4.3.0)
H	3.30.1950.10	Alpha Beta	2-Layer Sandwich	wza like fold	wza like domain	CATH (4.3.0)
H	1.20.5.70	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
E	3.10.560.10	Alpha Beta	Roll	Outer membrane lipoprotein wza fold like	Outer membrane lipoprotein wza domain like	CATH (4.3.0)
E	3.30.1950.10	Alpha Beta	2-Layer Sandwich	wza like fold	wza like domain	CATH (4.3.0)
E	1.20.5.70	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	OUTER MEMBRANE LIPOPROTEIN WZA	wide pore channel activity passive transmembrane transporter activity channel activity porin activity transporter activity transmembrane transporter activity macromolecule transmembrane transporter activity polysaccharide transmembrane transporter activity carbohydrate transmembrane transporter activity	localization transport monoatomic ion transport establishment of localization	protein-containing complex cellular anatomical structure membrane pore complex membrane protein complex cell outer membrane external encapsulating structure extracellular region cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR049712	Polysaccharide export protein	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR040716	Outer-membrane lipoprotein Wza, C-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003715	Polysaccharide export protein, N-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR054765	SLBB domain	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F, G, H	OPM	Transmembrane	Bitopic proteins	Outer membrane auxiliary proteins	OMA polysaccharide transporter

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G, H	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G, H	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Outer Membrane Proteins	Wza translocon for capsular polysaccharides

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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