2IJR | pdb_00002ijr

Crystal structure of a protein api92 from Yersinia pseudotuberculosis, Pfam DUF1281

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2ijra1	Multi-domain proteins (alpha and beta)	Api92-like	Api92-like	Api92-like	Hypothetical protein api92	(Yersinia pseudotuberculosis ) [TaxId: 633 ],	SCOPe (2.08)
A	d2ijra2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Yersinia pseudotuberculosis ) [TaxId: 633 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Api92-like	8022154	4002675	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Api92-like	8034534	3001588	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF1281	e2ijrA1	A: alpha arrays	X: helical domain in Api92-like proteins (From Topology)	H: helical domain in Api92-like proteins (From Topology)	T: helical domain in Api92-like proteins	F: DUF1281	ECOD (1.6)
A	DUF1281_1	e2ijrA2	A: a+b two layers	X: Alpha-beta plaits	H: ferredoxin-like domain in Api92-like proteins (From Topology)	T: ferredoxin-like domain in Api92-like proteins	F: DUF1281_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.70.1270	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Api92-like domains	CATH (4.2.0)
A	1.10.3530.10	Mainly Alpha	Orthogonal Bundle	Api92-like	Api92-like	CATH (4.2.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR041329	YubB, ferredoxin-like domain	Domain
A	IPR023136	Api92-like domain superfamily	Homologous Superfamily
A	IPR009694	Domain of unknown function DUF1281	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.