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 2IDA | pdb_00002ida

Solution NMR Structure of Protein RPA1320 from Rhodopseudomonas Palustris. Northeast Structural Genomics Consortium Target RpT3; Ontario Center for Structural Proteomics Target RP1313.

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2idaa1 Small proteins RING/U-box RING/U-box Zf-UBP Hypothetical protein RPA1320 (Rhodopseudomonas palustris ) [TaxId: 1076 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyZf-UBP 8022098 4002865 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRING/U-box like 8034478 3000160 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Azf-UBPe2idaA1 A: few secondary structure elementsX: RING/U-box-likeH: RING/U-box-likeT: RING/U-boxF: zf-UBPECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.40.10 Alpha Beta 2-Layer Sandwich Herpes Virus-1 Zinc/RING finger domain, C3HC4 (zinc finger)CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02148Zn-finger in ubiquitin-hydrolases and other protein (zf-UBP)Zn-finger in ubiquitin-hydrolases and other proteinDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Hypothetical protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
IPR001607Zinc finger, UBP-typeDomain