2GUJ

Three dimensional structure of the protein P54332 from Bacillus Subtilis. Northeast Structural Genomics Consortium target sr353.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2guja1	All beta proteins	Phage tail proteins	Phage tail proteins	XkdM-like	Phage-like element PBSX protein XkdM	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)
B	d2gujb_	All beta proteins	Phage tail proteins	Phage tail proteins	XkdM-like	Phage-like element PBSX protein XkdM	(Bacillus subtilis ) [TaxId: 1423 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	XkdM-like	8021740	4001806	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Phage tail proteins	8034120	3000268	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Phage tail proteins	8034120	3000268	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF2001	e2gujA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Phage tail proteins	F: DUF2001	ECOD (1.6)
B	DUF2001	e2gujB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Phage tail proteins	F: DUF2001	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.110.40	Mainly Beta	Roll	Pnp Oxidase	Chain A	CATH (4.3.0)
B	2.30.110.40	Mainly Beta	Roll	Pnp Oxidase	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF09393	Phage tail tube protein (DUF2001)	Phage tail tube protein	This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein (Swiss:P54332) whose structure adopts a beta barrel flanked with alpha helical regions.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR018989	Phage tail tube protein	Family
A, B	IPR038628	XkdM-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.