2GPZ | pdb_00002gpz

Transthyretin-like protein from Salmonella dublin

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B [auth C]	d2gpzc_	All beta proteins	Prealbumin-like	Transthyretin (synonym: prealbumin)	automated matches	automated matches	(Salmonella enterica subsp. enterica serovar Dublin ) [TaxId: 98360 ],	SCOPe (2.08)
A	d2gpza_	All beta proteins	Prealbumin-like	Transthyretin (synonym: prealbumin)	automated matches	automated matches	(Salmonella enterica subsp. enterica serovar Dublin ) [TaxId: 98360 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth C]	SCOP2B Superfamily	Transthyretin (synonym: prealbumin)	8070930	3000848	SCOP2B (2022-06-29)
A	SCOP2 Family	Transthyretin (synonym: prealbumin)	8070929	4002123	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Transthyretin (synonym: prealbumin)	8070930	3000848	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth C]	HMG_CoA_synt_N	e2gpzC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: HMG_CoA_synt_N	ECOD (v294.1)
A	Adenylsucc_synt	e2gpzA1	A: a/b three-layered sandwiches	X: Globin-like	H: Globin-like	T: Globin-like	F: Adenylsucc_synt	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth C]	2.60.40.180	Mainly Beta	Sandwich	Immunoglobulin-like	Transthyretin/hydroxyisourate hydrolase domain	CATH (4.3.0)
A	2.60.40.180	Mainly Beta	Sandwich	Immunoglobulin-like	Transthyretin/hydroxyisourate hydrolase domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth C]	transthyretin-like protein	hydrolase activity hydroxyisourate hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	nucleobase-containing compound metabolic process purine nucleobase metabolic process nucleobase-containing small molecule metabolic process nucleobase metabolic process small molecule metabolic process metabolic process cellular process primary metabolic process purine-containing compound metabolic process	cellular anatomical structure extracellular region periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth C]	IPR023416	Transthyretin/hydroxyisourate hydrolase domain	Domain
A, B [auth C]	IPR036817	Transthyretin/hydroxyisourate hydrolase domain superfamily	Homologous Superfamily
A, B [auth C]	IPR023418	Transthyretin, thyroxine binding site	Binding Site
A, B [auth C]	IPR000895	Transthyretin/hydroxyisourate hydrolase	Family
A, B [auth C]	IPR023419	Transthyretin, conserved site	Conserved Site
A, B [auth C]	IPR014306	Hydroxyisourate hydrolase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.