2GPI | pdb_00002gpi

Crystal structure of a protein of unknown function from duf1488 family (shew_3726) from shewanella loihica pv-4 at 1.60 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2gpia1	Alpha and beta proteins (a+b)	Shew3726-like	Shew3726-like	Shew3726-like	Hypothetical protein Shew3726	(Shewanella loihica PV-4 ) [TaxId: 323850 ],	SCOPe (2.08)
A	d2gpia2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Shewanella loihica PV-4 ) [TaxId: 323850 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Shew3726-like	8021719	4001898	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Shew3726-like	8034099	3000536	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF1488	e2gpiA1	A: a+b two layers	X: Shew3726-like	H: Shew3726-like (From Topology)	T: Shew3726-like	F: DUF1488	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.160.140	Alpha Beta	2-Layer Sandwich	Double Stranded RNA Binding Domain	Shew3726-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07369	Protein of unknown function (DUF1488) (DUF1488)	Protein of unknown function (DUF1488)	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR009962	Protein of unknown function DUF1488	Family
A	IPR036692	Shew3726-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.