2GBB | pdb_00002gbb

Crystal structure of secreted chorismate mutase from Yersinia pestis

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D		e2gbbD1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: HTHP	F:	ECOD (20:10:01)
C		e2gbbC1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: HTHP	F:	ECOD (20:10:01)
B		e2gbbB1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: HTHP	F:	ECOD (20:10:01)
A		e2gbbA1	A: Profilin-like	X: Immunoglobulin-related	H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	T: Cystatin	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.20.59.10	Mainly Alpha	Up-down Bundle	Chorismate Mutase Domain, subunit A	Chorismate mutase	CATH (4.3.0)
C	1.20.59.10	Mainly Alpha	Up-down Bundle	Chorismate Mutase Domain, subunit A	Chorismate mutase	CATH (4.3.0)
B	1.20.59.10	Mainly Alpha	Up-down Bundle	Chorismate Mutase Domain, subunit A	Chorismate mutase	CATH (4.3.0)
A	1.20.59.10	Mainly Alpha	Up-down Bundle	Chorismate Mutase Domain, subunit A	Chorismate mutase	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01817	Chorismate mutase type II (CM_2)	Chorismate mutase type II	Chorismate mutase EC:5.4.99.5 catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine [2,3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	putative chorismate mutase	isomerase activity chorismate mutase activity catalytic activity intramolecular transferase activity	monocarboxylic acid biosynthetic process benzene-containing compound metabolic process small molecule biosynthetic process oxoacid metabolic process salicylic acid biosynthetic process carboxylic acid metabolic process organic acid biosynthetic process organic acid metabolic process salicylic acid metabolic process carboxylic acid biosynthetic process biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process small molecule metabolic process monocarboxylic acid biosynthetic process benzene-containing compound metabolic process small molecule biosynthetic process oxoacid metabolic process salicylic acid biosynthetic process carboxylic acid metabolic process organic acid biosynthetic process organic acid metabolic process salicylic acid metabolic process carboxylic acid biosynthetic process biosynthetic process phenol-containing compound metabolic process phenol-containing compound biosynthetic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process dicarboxylic acid metabolic process chorismate metabolic process	cellular anatomical structure periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036979	Chorismate mutase domain superfamily	Homologous Superfamily
A, B, C, D	IPR008240	Chorismate mutase, periplasmic	Family
A, B, C, D	IPR051331	Chorismate mutase-related enzymes	Family
A, B, C, D	IPR002701	Chorismate mutase II, prokaryotic-type	Domain
A, B, C, D	IPR036263	Chorismate mutase type II superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.