2G7S
The crystal structure of transcriptional regulator, TetR family, from Agrobacterium tumefaciens
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2g7sa1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Tetracyclin repressor-like, N-terminal domain | Putative transcriptional regulator Atu0279 | (Agrobacterium fabrum str. C58 ) [TaxId: 176299 ], | SCOPe (2.08) |
A | d2g7sa2 | All alpha proteins | Tetracyclin repressor-like, C-terminal domain | Tetracyclin repressor-like, C-terminal domain | Tetracyclin repressor-like, C-terminal domain | Putative transcriptional regulator Atu0279 | (Agrobacterium fabrum str. C58 ) [TaxId: 176299 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Tetracyclin repressor-like | 8056459 | 4000333 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Homeodomain-like | 8056460 | 3000001 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TetR C-terminal domain-like | 8056461 | 3000086 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00440 | e2g7sA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
A | PF16925 | e2g7sA2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: PF16925 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.357.10 | Mainly Alpha | Orthogonal Bundle | Tetracycline Repressor | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00440 | Bacterial regulatory proteins, tetR family (TetR_N) | Bacterial regulatory proteins, tetR family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
transcriptional regulator, TetR family | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001647 | DNA-binding HTH domain, TetR-type | Domain | |
IPR036271 | Tetracyclin repressor-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily |