2G4C
Crystal Structure of human DNA polymerase gamma accessory subunit
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Class II aminoacyl-tRNA synthetase (aaRS)-like catalytic domain | 8029274 | 4001782 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Anticodon-binding domain of Class II aaRS | 8029273 | 4000507 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Class II aaRS and biotin synthetases | 8041653 | 3000058 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Class II aaRS ABD-related | 8041652 | 3000465 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Class II aaRS ABD-related | 8041652 | 3000465 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Class II aaRS and biotin synthetases | 8041653 | 3000058 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Class II aaRS ABD-related | 8041652 | 3000465 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Class II aaRS and biotin synthetases | 8041653 | 3000058 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Class II aaRS and biotin synthetases | 8041653 | 3000058 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Class II aaRS ABD-related | 8041652 | 3000465 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e2g4cA1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF03129 | e2g4cA2 | A: a/b three-layered sandwiches | X: Anticodon-binding domain of Class II aaRS (From Topology) | H: Anticodon-binding domain of Class II aaRS (From Topology) | T: Anticodon-binding domain of Class II aaRS | F: PF03129 | ECOD (1.6) |
B | F_UNCLASSIFIED | e2g4cB1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF03129 | e2g4cB2 | A: a/b three-layered sandwiches | X: Anticodon-binding domain of Class II aaRS (From Topology) | H: Anticodon-binding domain of Class II aaRS (From Topology) | T: Anticodon-binding domain of Class II aaRS | F: PF03129 | ECOD (1.6) |
D | F_UNCLASSIFIED | e2g4cD1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF03129 | e2g4cD2 | A: a/b three-layered sandwiches | X: Anticodon-binding domain of Class II aaRS (From Topology) | H: Anticodon-binding domain of Class II aaRS (From Topology) | T: Anticodon-binding domain of Class II aaRS | F: PF03129 | ECOD (1.6) |
C | F_UNCLASSIFIED | e2g4cC1 | A: a+b three layers | X: Class II aaRS and biotin synthetases (From Topology) | H: Class II aaRS and biotin synthetases (From Topology) | T: Class II aaRS and biotin synthetases | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF03129 | e2g4cC2 | A: a/b three-layered sandwiches | X: Anticodon-binding domain of Class II aaRS (From Topology) | H: Anticodon-binding domain of Class II aaRS (From Topology) | T: Anticodon-binding domain of Class II aaRS | F: PF03129 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
A | 3.40.50.800 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Anticodon-binding domain | CATH (4.3.0) |
B | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
B | 3.40.50.800 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Anticodon-binding domain | CATH (4.3.0) |
D | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
D | 3.40.50.800 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Anticodon-binding domain | CATH (4.3.0) |
C | 3.30.930.10 | Alpha Beta | 2-Layer Sandwich | BirA Bifunctional Protein | domain 2 | CATH (4.3.0) |
C | 3.40.50.800 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Anticodon-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR045864 | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) | Homologous Superfamily | |
IPR004154 | Anticodon-binding | Domain | |
IPR042064 | POLG2, C-terminal | Domain | |
IPR036621 | Anticodon-binding domain superfamily | Homologous Superfamily | |
IPR027031 | Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 | Family |