2G04 | pdb_00002g04

Crystal structure of fatty acid-CoA racemase from Mycobacterium tuberculosis H37Rv

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	CoA-transferase family III (CaiB/BaiF)	8061771	3000607	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	CoA-transferase family III (CaiB/BaiF)	8061771	3000607	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	CoA-transferase family III (CaiB/BaiF)	8061771	3000607	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CoA-transferase family III (CaiB/BaiF)	8061771	3000607	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CoA-transferase family III (CaiB/BaiF)	8061771	3000607	SCOP2B (2022-06-29)
A	SCOP2 Family	CoA-transferase family III (CaiB/BaiF)	8061770	4000567	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CoA-transferase family III (CaiB/BaiF)	8061771	3000607	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	ACR_tran	e2g04F1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: ACR_tran	ECOD (develop294)
E	ACR_tran	e2g04E1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: ACR_tran	ECOD (develop294)
D	ACR_tran	e2g04D1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: ACR_tran	ECOD (develop294)
C	ACR_tran	e2g04C1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: ACR_tran	ECOD (develop294)
B	ACR_tran	e2g04B1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: ACR_tran	ECOD (develop294)
A	ACPS	e2g04A1	A: alpha bundles	X: Profilin-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ACPS	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.40.50.10540	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Crotonobetainyl-coa:carnitine coa-transferase	CATH (4.3.0)
F	3.30.1540.10	Alpha Beta	2-Layer Sandwich	formyl-coa transferase, domain 3	formyl-coa transferase, domain 3	CATH (4.3.0)
E	3.40.50.10540	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Crotonobetainyl-coa:carnitine coa-transferase	CATH (4.3.0)
E	3.30.1540.10	Alpha Beta	2-Layer Sandwich	formyl-coa transferase, domain 3	formyl-coa transferase, domain 3	CATH (4.3.0)
D	3.40.50.10540	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Crotonobetainyl-coa:carnitine coa-transferase	CATH (4.3.0)
D	3.30.1540.10	Alpha Beta	2-Layer Sandwich	formyl-coa transferase, domain 3	formyl-coa transferase, domain 3	CATH (4.3.0)
C	3.40.50.10540	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Crotonobetainyl-coa:carnitine coa-transferase	CATH (4.3.0)
C	3.30.1540.10	Alpha Beta	2-Layer Sandwich	formyl-coa transferase, domain 3	formyl-coa transferase, domain 3	CATH (4.3.0)
B	3.40.50.10540	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Crotonobetainyl-coa:carnitine coa-transferase	CATH (4.3.0)
B	3.30.1540.10	Alpha Beta	2-Layer Sandwich	formyl-coa transferase, domain 3	formyl-coa transferase, domain 3	CATH (4.3.0)
A	3.40.50.10540	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Crotonobetainyl-coa:carnitine coa-transferase	CATH (4.3.0)
A	3.30.1540.10	Alpha Beta	2-Layer Sandwich	formyl-coa transferase, domain 3	formyl-coa transferase, domain 3	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF02515	CoA-transferase family III (CoA_transf_3)	CoA-transferase family III	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	PROBABLE FATTY-ACID-CoA RACEMASE FAR	isomerase activity racemase and epimerase activity alpha-methylacyl-CoA racemase activity catalytic activity	-	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR050509	Coenzyme A-transferase family III	Family
A, B, C, D, E A, B, C, D, E, F	IPR023606	CoA-transferase family III domain 1 superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR044855	CoA-transferase family III domain 3 superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR003673	CoA-transferase family III	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.