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Crystal structure of dihydropyrimidinase from Saccharomyces kluyveri in complex with the reaction product N-carbamyl-beta-alanine External Resource: Annotation Chains Domain Info Class Fold Superfamily Family Domain Species Provenance Source (Version) A d2fvma1 All beta proteins Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase) Dihydropyrimidine amidohydrolase Pyd2 (Lachancea kluyveri ) [TaxId: 4934 ], SCOPe (2.08) A d2fvma2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Dihydropyrimidine amidohydrolase Pyd2 (Lachancea kluyveri ) [TaxId: 4934 ], SCOPe (2.08) B d2fvmb1 All beta proteins Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase) Dihydropyrimidine amidohydrolase Pyd2 (Lachancea kluyveri ) [TaxId: 4934 ], SCOPe (2.08) B d2fvmb2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Dihydropyrimidine amidohydrolase Pyd2 (Lachancea kluyveri ) [TaxId: 4934 ], SCOPe (2.08) C d2fvmc1 All beta proteins Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase) Dihydropyrimidine amidohydrolase Pyd2 (Lachancea kluyveri ) [TaxId: 4934 ], SCOPe (2.08) C d2fvmc2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Dihydropyrimidine amidohydrolase Pyd2 (Lachancea kluyveri ) [TaxId: 4934 ], SCOPe (2.08) D d2fvmd1 All beta proteins Composite domain of metallo-dependent hydrolases Composite domain of metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase) Dihydropyrimidine amidohydrolase Pyd2 (Lachancea kluyveri ) [TaxId: 4934 ], SCOPe (2.08) D d2fvmd2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Dihydropyrimidine amidohydrolase Pyd2 (Lachancea kluyveri ) [TaxId: 4934 ], SCOPe (2.08)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8041393 3000176 SCOP2B (2022-06-29) A SCOP2B Superfamily Metallo-dependent hydrolases 8041395 3000428 SCOP2B (2022-06-29) A SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8041393 3000176 SCOP2B (2022-06-29) B SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8041393 3000176 SCOP2B (2022-06-29) B SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8041393 3000176 SCOP2B (2022-06-29) B SCOP2B Superfamily Metallo-dependent hydrolases 8041395 3000428 SCOP2B (2022-06-29) C SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8041393 3000176 SCOP2B (2022-06-29) C SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8041393 3000176 SCOP2B (2022-06-29) C SCOP2B Superfamily Metallo-dependent hydrolases 8041395 3000428 SCOP2B (2022-06-29) D SCOP2B Superfamily Metallo-dependent hydrolases 8041395 3000428 SCOP2B (2022-06-29) D SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8041393 3000176 SCOP2B (2022-06-29) D SCOP2B Superfamily Composite domain of metallo-dependent hydrolases 8041393 3000176 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A F_UNCLASSIFIED e2fvmA1 A: beta sandwiches X: Composite domain of metallo-dependent hydrolases (From Topology) H: Composite domain of metallo-dependent hydrolases (From Topology) T: Composite domain of metallo-dependent hydrolases F: F_UNCLASSIFIED ECOD (1.6) A PF01979 e2fvmA2 A: a/b barrels X: TIM beta/alpha-barrel H: TIM barrels (From Topology) T: TIM barrels F: PF01979 ECOD (1.6) B F_UNCLASSIFIED e2fvmB1 A: beta sandwiches X: Composite domain of metallo-dependent hydrolases (From Topology) H: Composite domain of metallo-dependent hydrolases (From Topology) T: Composite domain of metallo-dependent hydrolases F: F_UNCLASSIFIED ECOD (1.6) B PF01979 e2fvmB2 A: a/b barrels X: TIM beta/alpha-barrel H: TIM barrels (From Topology) T: TIM barrels F: PF01979 ECOD (1.6) C F_UNCLASSIFIED e2fvmC1 A: beta sandwiches X: Composite domain of metallo-dependent hydrolases (From Topology) H: Composite domain of metallo-dependent hydrolases (From Topology) T: Composite domain of metallo-dependent hydrolases F: F_UNCLASSIFIED ECOD (1.6) C PF01979 e2fvmC2 A: a/b barrels X: TIM beta/alpha-barrel H: TIM barrels (From Topology) T: TIM barrels F: PF01979 ECOD (1.6) D F_UNCLASSIFIED e2fvmD1 A: beta sandwiches X: Composite domain of metallo-dependent hydrolases (From Topology) H: Composite domain of metallo-dependent hydrolases (From Topology) T: Composite domain of metallo-dependent hydrolases F: F_UNCLASSIFIED ECOD (1.6) D PF01979 e2fvmD2 A: a/b barrels X: TIM beta/alpha-barrel H: TIM barrels (From Topology) T: TIM barrels F: PF01979 ECOD (1.6)
Chains Accession Name Description Comments Source PF01979 Amidohydrolase family (Amidohydro_1) Amidohydrolase family This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ... This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source [2]. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyse the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit [3]. Dihydroorotases (EC:3.5.2.3) are also included [4-5]. Less Domain
Chains Polymer Molecular Function Biological Process Cellular Component dihydropyrimidinase -