Cell division protein ylmH from Streptococcus pneumoniae
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth X] | YlmH_RBD | e2fphX1 | A: a/b three-layered sandwiches | X: Cation-proton antiporter | H: Serralysin-like metalloprotease-C | T: Serralysin-like metalloprotease-C | F: YlmH_RBD | ECOD (v294.1) |
| A [auth X] | YlmH_1st | e2fphX2 | A: a/b three-layered sandwiches | X: Cation-proton antiporter | H: Serralysin-like metalloprotease-C | T: Serralysin-like metalloprotease-C | F: YlmH_1st | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth X] | 3.30.1370.160 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
| A [auth X] | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth X] | PF21278 | YlmH, N-terminal (YlmH_1st) | YlmH, N-terminal | This is a domain found at the N-terminal of the Putative RNA-binding protein YlmH. | Domain |
| A [auth X] | PF17774 | Putative RNA-binding domain in YlmH (YlmH_RBD) | Putative RNA-binding domain in YlmH | This domain adopts an RRM like fold and is found in the B. subtilis YlmH cell division protein. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth X] | ylmH | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth X] | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily |
| A [auth X] | IPR002942 | RNA-binding S4 domain | Domain |
| A [auth X] | IPR048443 | Ribosome-associated protein quality control protein P2, N-terminal domain | Domain |
| A [auth X] | IPR040591 | Ribosome-associated protein quality control protein P2, RNA-binding domain | Domain |
| A [auth X] | IPR036986 | RNA-binding S4 domain superfamily | Homologous Superfamily |
