2FFJ | pdb_00002ffj

CRYSTAL STRUCTURE OF a DUF89 family protein (AF1104) FROM ARCHAEOGLOBUS FULGIDUS DSM 4304 AT 2.45 A RESOLUTION

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2ffjb_	Multi-domain proteins (alpha and beta)	AF1104-like	AF1104-like	AF1104-like	Hypothetical protein AF1104	(Archaeoglobus fulgidus DSM 4304 ) [TaxId: 224325 ],	SCOPe (2.08)
A	d2ffja1	Multi-domain proteins (alpha and beta)	AF1104-like	AF1104-like	AF1104-like	Hypothetical protein AF1104	(Archaeoglobus fulgidus DSM 4304 ) [TaxId: 224325 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	AF1104-like	8040863	3001930	SCOP2B (2022-06-29)
A	SCOP2 Family	AF1104-like	8028484	4002947	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	AF1104-like	8040863	3001930	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	ACOX	e2ffjB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: ACOX	ECOD (v294.1)
B	RecU	e2ffjB2	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: RecU	ECOD (v294.1)
A	ARMT1-like_dom	e2ffjA1	A: alpha bundles	X: alpha-helical domain in AF1104-like proteins	H: alpha-helical domain in AF1104-like proteins	T: alpha-helical domain in AF1104-like proteins	F: ARMT1-like_dom	ECOD (v294.1)
A	ARMT1-like_dom	e2ffjA2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: CoA-dependent acyltransferases	T: CoA-dependent acyltransferases	F: ARMT1-like_dom	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.8.380	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (4.3.0)
B	1.10.285.20	Mainly Alpha	Orthogonal Bundle	Glutamate Dehydrogenase	Chain A, domain 3	CATH (4.3.0)
B	3.40.50.10880	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF01937, DUF89, domain 3	CATH (4.3.0)
A	1.10.8.380	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (4.3.0)
A	1.10.285.20	Mainly Alpha	Orthogonal Bundle	Glutamate Dehydrogenase	Chain A, domain 3	CATH (4.3.0)
A	3.40.50.10880	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Uncharacterised protein PF01937, DUF89, domain 3	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	conserved hypothetical protein	hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR014444	Damage-control phosphatase PH1575-like	Family
A, B	IPR002791	Damage-control phosphatase ARMT1-like, metal-binding domain	Domain
A, B	IPR053682	Damage-control phosphatase	Family
A, B	IPR036075	Damage-control phosphatase ARMT1-like, metal-binding domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.