2FEF | pdb_00002fef

The Crystal Structure of Protein PA2201 from Pseudomonas aeruginosa

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d2fefc1	All alpha proteins	Bromodomain-like	PA2201 N-terminal domain-like	PA2201 N-terminal domain-like	Hypothetical protein PA2201	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
C	d2fefc2	All alpha proteins	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	Hypothetical protein PA2201	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
B	d2fefb1	All alpha proteins	Bromodomain-like	PA2201 N-terminal domain-like	PA2201 N-terminal domain-like	Hypothetical protein PA2201	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
B	d2fefb2	All alpha proteins	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	Hypothetical protein PA2201	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
A	d2fefa1	All alpha proteins	Bromodomain-like	PA2201 N-terminal domain-like	PA2201 N-terminal domain-like	Hypothetical protein PA2201	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)
A	d2fefa2	All alpha proteins	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	Hypothetical protein PA2201	(Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	PA2201 C-terminal domain-like	8040831	3001640	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PA2201 N-terminal domain-like	8040829	3001166	SCOP2B (2022-06-29)
B	SCOP2 Family	PA2201 N-terminal domain-like	8028450	4001257	SCOP2 (2022-06-29)
B	SCOP2 Family	PA2201 C-terminal domain-like	8028452	4001462	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	PA2201 N-terminal domain-like	8040829	3001166	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	PA2201 C-terminal domain-like	8040831	3001640	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	PA2201 C-terminal domain-like	8040831	3001640	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	PA2201 N-terminal domain-like	8040829	3001166	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C		e2fefC1	A: alpha bundles	X: EGF-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (develop294)
C		e2fefC2	A: alpha bundles	X: EGF-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (develop294)
B		e2fefB1	A: alpha bundles	X: EGF-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (develop294)
B		e2fefB2	A: alpha bundles	X: EGF-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (develop294)
A	PA2201_N	e2fefA1	A: alpha bundles	X: Bromodomain-like	H: PA2201 N-terminal domain-like	T: PA2201 N-terminal domain-like	F: PA2201_N	ECOD (develop294)
A	PoNi_C	e2fefA2	A: alpha bundles	X: PA2201 C-terminal domain-like	H: PA2201 C-terminal domain-like	T: PA2201 C-terminal domain-like	F: PoNi_C	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	1.20.1440.70	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	PA2201 N-terminal domain-like	CATH (4.3.0)
C	1.10.3920.10	Mainly Alpha	Orthogonal Bundle	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	CATH (4.3.0)
B	1.20.1440.70	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	PA2201 N-terminal domain-like	CATH (4.3.0)
B	1.10.3920.10	Mainly Alpha	Orthogonal Bundle	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	CATH (4.3.0)
A	1.20.1440.70	Mainly Alpha	Up-down Bundle	de novo design (two linked rop proteins)	PA2201 N-terminal domain-like	CATH (4.3.0)
A	1.10.3920.10	Mainly Alpha	Orthogonal Bundle	PA2201 C-terminal domain-like	PA2201 C-terminal domain-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF08929	PoNe immunity proteins (PoNi), C-terminal (PoNi_C)	PoNe immunity proteins (PoNi), C-terminal	This entry represents the C-terminal domain of the PoNe immunity proteins (PoNi), which antagonize the DNAse toxin PoNe (Polymorphic Nuclease effector) [1]. PoNi proteins may directly interact with PoNe.	Domain
A, B, C	PF20734	PA2201 N-terminal domain-like (PA2201_N)	PA2201 N-terminal domain-like	This entry represents the N-terminal helical bundle domain from the Pseudomonas aeruginosa PA2201 protein. This protein also contains a C-terminal Pfam:PF08929 domain.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR028997	PA2201-like, N-terminal	Homologous Superfamily
A, B, C	IPR048852	PoNi, N-terminal domain 2	Domain
A, B, C	IPR028983	PA2201-like, C-terminal	Homologous Superfamily
A, B, C	IPR015025	PoNi, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.