Structure of periplasmic binding protein BugD
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | SBP_bac_1 | e2f5xC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: SBP_bac_1 | ECOD (v294.1) |
| B | LysR_substrate | e2f5xB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: LysR_substrate | ECOD (v294.1) |
| A | TctC | e2f5xA1 | A: a/b three-layered sandwiches | X: Alpha-beta plaits | H: Protease propeptides/inhibitors | T: Protease propeptides/inhibitors | F: TctC | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.40.190.150 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| C | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| B | 3.40.190.150 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.150 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03401 | Tripartite tricarboxylate transporter family receptor (TctC) | Tripartite tricarboxylate transporter family receptor | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR005064 | Bordetella uptake gene | Family | |
| IPR042100 | Bordetella uptake gene, domain 1 | Homologous Superfamily |
