2F1V | pdb_00002f1v

Outer membrane protein OmpW

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	OMPA barrel-like	8052231	3000208	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	OMPA barrel-like	8052231	3000208	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	OMPA barrel-like	8052231	3000208	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	OMPA barrel-like	8052231	3000208	SCOP2B (2022-06-29)
B	SCOP2 Family	Outer membrane protein OmpW-like	8045156	4004327	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	OMPA barrel-like	8052231	3000208	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	OMPA barrel-like	8052231	3000208	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	OmpW	e2f1vF1	A: beta barrels	X: Outer membrane meander beta-barrels	H: OMPA-like (From Topology)	T: OMPA-like	F: OmpW	ECOD (1.6)
E	OmpW	e2f1vE1	A: beta barrels	X: Outer membrane meander beta-barrels	H: OMPA-like (From Topology)	T: OMPA-like	F: OmpW	ECOD (1.6)
D	OmpW	e2f1vD1	A: beta barrels	X: Outer membrane meander beta-barrels	H: OMPA-like (From Topology)	T: OMPA-like	F: OmpW	ECOD (1.6)
C	OmpW	e2f1vC1	A: beta barrels	X: Outer membrane meander beta-barrels	H: OMPA-like (From Topology)	T: OMPA-like	F: OmpW	ECOD (1.6)
B	OmpW	e2f1vB1	A: beta barrels	X: Outer membrane meander beta-barrels	H: OMPA-like (From Topology)	T: OMPA-like	F: OmpW	ECOD (1.6)
A	OmpW	e2f1vA1	A: beta barrels	X: Outer membrane meander beta-barrels	H: OMPA-like (From Topology)	T: OMPA-like	F: OmpW	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	2.40.160.20	Mainly Beta	Beta Barrel	Porin		CATH (4.3.0)
E	2.40.160.20	Mainly Beta	Beta Barrel	Porin		CATH (4.3.0)
D	2.40.160.20	Mainly Beta	Beta Barrel	Porin		CATH (4.3.0)
C	2.40.160.20	Mainly Beta	Beta Barrel	Porin		CATH (4.3.0)
B	2.40.160.20	Mainly Beta	Beta Barrel	Porin		CATH (4.3.0)
A	2.40.160.20	Mainly Beta	Beta Barrel	Porin		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF03922	OmpW family (OmpW)	OmpW family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Outer membrane protein W	-	transmembrane transport localization transport cellular process establishment of localization	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR011250	Outer membrane protein/outer membrane enzyme PagP, beta-barrel	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR005618	Outer membrane protein, OmpW	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C, D, E A, B, C, D, E, F	OPM	Transmembrane	Beta-barrel transmembrane	Outer membrane protein W (OmpW) family (n=8,S=10)	Outer membrane protein W (OmpW) family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Beta-Barrel Membrane Proteins: Monomeric/Dimeric	OmpW outer membrane protein

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.